PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG66316.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family bHLH
Protein Properties Length: 246aa    MW: 27064.2 Da    PI: 6.4069
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG66316.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH361.2e-1196140754
                 HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  rE+ RRdr+N++f eL  ll +    +++K +Ka+iL  A++ + +L
  GBG66316.1  96 SREKMRRDRLNERFTELSALLEPG---RQPKTDKATILVDAIRIVTQL 140
                 79*********************9...9**************999888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MGQHEEGMAG NVTSPNAGWL SVLFSDNGSP EDIEDSQSCG QLFWATSAPS AEQAECSAEG  60
DNHKGEVADA NKKESTVNGR KRDRDESHST ASCKASREKM RRDRLNERFT ELSALLEPGR  120
QPKTDKATIL VDAIRIVTQL RNETAQLKET NRQLSESIKE LKSEKNELRD EKARLKMEKD  180
RLEMHMKSMV PASYLTHPAA AALATSHGPK VGSTGAPPFT PGFMWQWIPP SALDTSHDGL  240
LRPPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.15e-58bHLH family protein