PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG66387.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 906aa MW: 97460.5 Da PI: 6.3315

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG66387.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	34	7.9e-11	234	310	2	70
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekk 70 Wt ++ aLi+a+r+ +++l + k k +We+v k++ + g+ +r+++ C +kw+nl +++k + + +++ GBG66387.1 234 WTVEHMIALIRAKRDQDSHLAglghnygQMKTKTWKWEDVEKRLVQMGVtSRKAIDCGKKWDNLYQQFKSVHTFMGE 310 ************888877744333225689999*****99999899***************99887665 PP

Sequence ? help Back to Top
Protein Sequence Length: 906 aa Download sequence
MGSQVYRHES TPTYTDLLEG RTPAGYDAGL VDMSFGLRSG SGKGMMHTVV MNPASATKHT 60 SPSVRAAGPA DSRGFVSPRR VALSTASVAA SRTKTGGLAG CRTTTPGGTI DREGNDDERA 120 ATEVVGRQFW DDERQRLCSA HTSSITRGVA RMSVGVDDVF VDCDAGGGEE IAADEGRDDN 180 DEDDDGEMEI RPVGRKRGGS TATTKVRESR TGRKGKKCAE ELSAGDGTKS RDFWTVEHMI 240 ALIRAKRDQD SHLAGLGHNY GQMKTKTWKW EDVEKRLVQM GVTSRKAIDC GKKWDNLYQQ 300 FKSVHTFMGE SAKPNFFTLT PGERRERGFD FRMDERVYSE MKAMSGSDHT IHPTNLADTR 360 APGGVQMHGP AGGRNESGGS DVGGGGPDDD RGSTRDSSFS GSGGGGGGKG KRNGGSGDGG 420 ESQKGRGHVP KSKRPRFDDE SSEHTGDMQG EEVSMVDIQG VDVMNRLGFG RDGVSREQLA 480 ALKQSLVGGV AVTLARTPKA AGIVMTDARV ARQVPPKVGQ VDTTAGGGRT AAADNTTGSG 540 VAEAAEEGRV DDVCRDDGRK DGKGGGDDDD DRPVSAMVKK VIKQDDLEDR SKLWIACDAF 600 WGQGPGKPLR EAVGDCTDYL VAIANGDAGA EPPSMLVMPP NDVSRFKIED PAQCEPALRR 660 ASNVEKVVLR AIHSRIFKSS SRSSGFARGE SYVTVDFATD VARVWQALEW SKVVSLALVY 720 HTLAMKMDVP LWFAGVKIVD RPEDEDTAAR QEATVLRLAD CWTDAVWCGQ WADGGRVKQD 780 RLTRLADCLR VLLSACMWIM RMGGDDDRSH YEASFYASMV AKPTLIAAGS YIFNWRRHIV 840 DSTNLVLDRL GKAHLTLGDY PHCIPEWVDC GLVSGHNAAL KNATEAAKHG WIGSGPPVGD 900 DGDNEK

Sequence ? help Back to Top

Protein Sequence Length: 906 aa Download sequence

MGSQVYRHES TPTYTDLLEG RTPAGYDAGL VDMSFGLRSG SGKGMMHTVV MNPASATKHT  60
SPSVRAAGPA DSRGFVSPRR VALSTASVAA SRTKTGGLAG CRTTTPGGTI DREGNDDERA  120
ATEVVGRQFW DDERQRLCSA HTSSITRGVA RMSVGVDDVF VDCDAGGGEE IAADEGRDDN  180
DEDDDGEMEI RPVGRKRGGS TATTKVRESR TGRKGKKCAE ELSAGDGTKS RDFWTVEHMI  240
ALIRAKRDQD SHLAGLGHNY GQMKTKTWKW EDVEKRLVQM GVTSRKAIDC GKKWDNLYQQ  300
FKSVHTFMGE SAKPNFFTLT PGERRERGFD FRMDERVYSE MKAMSGSDHT IHPTNLADTR  360
APGGVQMHGP AGGRNESGGS DVGGGGPDDD RGSTRDSSFS GSGGGGGGKG KRNGGSGDGG  420
ESQKGRGHVP KSKRPRFDDE SSEHTGDMQG EEVSMVDIQG VDVMNRLGFG RDGVSREQLA  480
ALKQSLVGGV AVTLARTPKA AGIVMTDARV ARQVPPKVGQ VDTTAGGGRT AAADNTTGSG  540
VAEAAEEGRV DDVCRDDGRK DGKGGGDDDD DRPVSAMVKK VIKQDDLEDR SKLWIACDAF  600
WGQGPGKPLR EAVGDCTDYL VAIANGDAGA EPPSMLVMPP NDVSRFKIED PAQCEPALRR  660
ASNVEKVVLR AIHSRIFKSS SRSSGFARGE SYVTVDFATD VARVWQALEW SKVVSLALVY  720
HTLAMKMDVP LWFAGVKIVD RPEDEDTAAR QEATVLRLAD CWTDAVWCGQ WADGGRVKQD  780
RLTRLADCLR VLLSACMWIM RMGGDDDRSH YEASFYASMV AKPTLIAAGS YIFNWRRHIV  840
DSTNLVLDRL GKAHLTLGDY PHCIPEWVDC GLVSGHNAAL KNATEAAKHG WIGSGPPVGD  900
DGDNEK