PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG66931.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

ERF

Protein Properties

Length: 1252aa MW: 128171 Da PI: 7.0527

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG66931.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	35.8	1.9e-11	1073	1114	2	48
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaia 48 +++GV+w k +++W+A+I+ + k + lg + t eeAa+a+++ GBG66931.1 1073 KFRGVCWSKGTKKWRAQIKI------NqKGVTLGDYLTQEEAAAAYDR 1114 89*************999......44****************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1252 aa Download sequence
MDQHSDGSSC RLLSRTGSSA ESSSAAIDMR DLSSSPRCTG RMSPSCAATS RFDVSGGSRT 60 MGEDGEVGVS PLAASLGGER NANATGMGAR PLIGAVRNHV GCGVGRVVGG GVGVGVGVGV 120 GVGGEGGEDG APGVFGDPAA FGGNDMCTMS SVVFSSSDTF GFGSGGDGCG LNSTRGVISS 180 SCGMEGLMGG GVAGPEEMPM ETGGAAAAAA AAAAAARMRG ALGTSAGSHR RGGAIGIAGG 240 GGGGGGGGGL FFGHSTGSSG AIDVGSPSAF HPRRDSSVGL GRVADVAPGL CSARVTDSNS 300 VCTEPSPLLG AQMATTAQNP MHEESLRRAF GGSDATLRAE CCDMEGGLGH KQQSMELDGE 360 QRRSHHHSQH HSHPSQHRSP HPQQLHGEAQ GEDGEYRLAA RQWEGLKDVM VASTSAAAMD 420 ELEEADRVIK SLSANEAIRE QIKAAINGRL QGGGTAELSF GAASGSPTRQ DDEAMSVAAA 480 AAGVMWVHPA SHVDPSSPSC ETSGRLGNSQ CVAGPLDLGS AAARLGAERS DQRSVVIYGE 540 HVAACSEAAG LIQQLSAALP HSSRSARGNS GCGEPHGSPP HSSRSYSSNA FCGGGGGKHA 600 HAHDEHAAQA DASSSVGCYT SLDLFRKAQP QTLSYDDYLH MAVVAAAAAA SGGTTISCSA 660 FGSPNCWGAG EPAVSDLSAL TGVAGGGGGG GTGRGGGGER GVQQAQGTPT NAAAAAAACM 720 VNLHHDGLRL MQHHNPRLLT STTACPSAGA LEAALMFGGS SQPRPGSPYD VASSLSSIVH 780 VHRDASDWLQ AVMNASPADT HAHAHHAANP THPVTSAAVA AAAAAAVRHH AATAAAVYST 840 TGESPSTSTP CTDSMAVCGG RGEAGSTVTL PHHMGIAAGA AGECRSESTM TDAVLALGDH 900 SVAASHSHQL HPDVRNLLRE YAKLDFASSL LMQGGGAVSG NGMGAVAPPD SMMGMDMVMM 960 NQARGNGGAG CSSSFDSKTA AGTDGAKRTS KFIGIAWQKR GWQARVKKGT RLNLGVWQTE 1020 ELAAKVRDRA AYKLLGSKAV LNFELTPEER ATLDRMSDEA FFASLRLAKT RRKFRGVCWS 1080 KGTKKWRAQI KINQKGVTLG DYLTQEEAAA AYDRELIKRD GIRAFTNASI TFGVPNEHVR 1140 CLDFQSVARL YRLESKGSGS SKHRERRERL LEVQKQQQQQ QQQQQQQQQQ QQQQQQQQQL 1200 LLQQHQQQEH DQKPSLLSIA GRSASEPADT TAAVCGMQSS PLRGDSSCPV TL

Sequence ? help Back to Top

Protein Sequence Length: 1252 aa Download sequence

MDQHSDGSSC RLLSRTGSSA ESSSAAIDMR DLSSSPRCTG RMSPSCAATS RFDVSGGSRT  60
MGEDGEVGVS PLAASLGGER NANATGMGAR PLIGAVRNHV GCGVGRVVGG GVGVGVGVGV  120
GVGGEGGEDG APGVFGDPAA FGGNDMCTMS SVVFSSSDTF GFGSGGDGCG LNSTRGVISS  180
SCGMEGLMGG GVAGPEEMPM ETGGAAAAAA AAAAAARMRG ALGTSAGSHR RGGAIGIAGG  240
GGGGGGGGGL FFGHSTGSSG AIDVGSPSAF HPRRDSSVGL GRVADVAPGL CSARVTDSNS  300
VCTEPSPLLG AQMATTAQNP MHEESLRRAF GGSDATLRAE CCDMEGGLGH KQQSMELDGE  360
QRRSHHHSQH HSHPSQHRSP HPQQLHGEAQ GEDGEYRLAA RQWEGLKDVM VASTSAAAMD  420
ELEEADRVIK SLSANEAIRE QIKAAINGRL QGGGTAELSF GAASGSPTRQ DDEAMSVAAA  480
AAGVMWVHPA SHVDPSSPSC ETSGRLGNSQ CVAGPLDLGS AAARLGAERS DQRSVVIYGE  540
HVAACSEAAG LIQQLSAALP HSSRSARGNS GCGEPHGSPP HSSRSYSSNA FCGGGGGKHA  600
HAHDEHAAQA DASSSVGCYT SLDLFRKAQP QTLSYDDYLH MAVVAAAAAA SGGTTISCSA  660
FGSPNCWGAG EPAVSDLSAL TGVAGGGGGG GTGRGGGGER GVQQAQGTPT NAAAAAAACM  720
VNLHHDGLRL MQHHNPRLLT STTACPSAGA LEAALMFGGS SQPRPGSPYD VASSLSSIVH  780
VHRDASDWLQ AVMNASPADT HAHAHHAANP THPVTSAAVA AAAAAAVRHH AATAAAVYST  840
TGESPSTSTP CTDSMAVCGG RGEAGSTVTL PHHMGIAAGA AGECRSESTM TDAVLALGDH  900
SVAASHSHQL HPDVRNLLRE YAKLDFASSL LMQGGGAVSG NGMGAVAPPD SMMGMDMVMM  960
NQARGNGGAG CSSSFDSKTA AGTDGAKRTS KFIGIAWQKR GWQARVKKGT RLNLGVWQTE  1020
ELAAKVRDRA AYKLLGSKAV LNFELTPEER ATLDRMSDEA FFASLRLAKT RRKFRGVCWS  1080
KGTKKWRAQI KINQKGVTLG DYLTQEEAAA AYDRELIKRD GIRAFTNASI TFGVPNEHVR  1140
CLDFQSVARL YRLESKGSGS SKHRERRERL LEVQKQQQQQ QQQQQQQQQQ QQQQQQQQQL  1200
LLQQHQQQEH DQKPSLLSIA GRSASEPADT TAAVCGMQSS PLRGDSSCPV TL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.1	6e-14	AP2 family protein