PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG67211.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 1331aa MW: 145037 Da PI: 5.0974

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG67211.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	37.4	6.6e-12	853	927	2	69
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 W+ + + aLi+a+r+ + +l+ r k ++ +W +v+ ++++ g+ r+ +C +kw+nl +++kk+ + ++ GBG67211.1 853 WSVDDIIALIRAKRDQDAHLQgmghaytRMKPREWKWLDVATRLKKVGVDREVDRCGKKWDNLMQQFKKVHHFQG 927 99**********777777644333336789999********************************987665 PP

Sequence ? help Back to Top
Protein Sequence Length: 1331 aa Download sequence
MGVLVVLFGQ GDAHRTANDK VENSTRAYSG HHPADDGATL EGNEVQEGTD TGGGGNETEE 60 NETETEHREP QGQRTGKGDN KDESQLTDTK PRKTIGERNA RHGSAAANAK TTATSRHRRS 120 GRVKSRENLE NPSDTKDREN PENPVETRER DVANERETAG EEENTAAGGT KQREAVEVEE 180 ETGAEAEKAA REGRAMRARG KGEGDGDKEL GEREGSRRTS EEDGKAEGKE TGEQEGSQRR 240 TVEDEDRAAV EMKESPAVKA TTVAANTEPK TGNGTEEREG TQGTHAADMQ AVTGEATQDR 300 TADAKPDEQV LVEGRAQAED RAAEGNTTAI AQTGRAKGRD DNADRRSHEG NKQGGGKDGR 360 NRREQRQPEV DENREPEEKE QREEHEVGED RRAETEAGEV RPDPDGGAMV GQAQPGGKGE 420 EKERGLEETA LRGEDQPGGK GEEEEEEQVP EDAVHGEQKD IDEEDQHPQR GDTVQRPRHA 480 NGRGRPLRGD ADRERPHRDD TAEGNNDHDE QSEHQEVRRR CVKNNDRMEG WKAISGSAVE 540 RGGRWSEHSP SNSPRPSERS RHAHLPPHLQ PLPDKDDEEG DDRWSRTVPL GSGSTQEWAA 600 TELFGSRDGG KGQSYTELLQ KGLSDTDGDG GVNLSFGLGS GRSAVISQTV VVNPHPDDDG 660 SDVTAVQRSP RSPAPLREAS GNNNDPPRQQ FRSPSVCRGA SARPQWMQSP SPLSAGLSAG 720 RRVGECRETA PVVADVGDAR DEREVWAEQR RLMRSVREES ITRGVQRLRV GEDGHDGEEA 780 GADAHDPDWN DNGAEGWEDD AGNISPSKQA AAMGGRGGKT KSCGGNGRRG KRTAGKGSDA 840 EGDVDGEGGC HFWSVDDIIA LIRAKRDQDA HLQGMGHAYT RMKPREWKWL DVATRLKKVG 900 VDREVDRCGK KWDNLMQQFK KVHHFQGLTG KHDFFQLSGK DRMSKGFSFN MDRAVYDEIL 960 GSTAKNHTIN PKNVADTGAQ GGVRLLSASS PDPESVGDGD GGAEHDDDDD GSTKGSSQMT 1020 GGAGGFDKRK STRQQTFEAM MECMEKHGAL MVSTKESNNK RHCSIAIRQC EALEAEIEVQ 1080 KKHYAASDEV SKLMCHALLE IAKAIGKPGG GSPAGMVARA GYAVGGGGSN AGEGATTGVK 1140 AGDIPGKGDD DDPLVNRLRQ RNTREGMEAA AKLWVDDLRF WNEREGFAIV KLIAEARGYL 1200 VVVARGEQPP PIRRSIVFPH NSIPQHEIAD GSELNAAKER ALKVQGIALR VIHGWVFKSQ 1260 NRQRGYHAAY QYALNHAATD IARSMWMGED WRYCVSPMVV HHTLDMDMKL PLWFVGADVE 1320 DRHEDDGLAA Y

Sequence ? help Back to Top

Protein Sequence Length: 1331 aa Download sequence

MGVLVVLFGQ GDAHRTANDK VENSTRAYSG HHPADDGATL EGNEVQEGTD TGGGGNETEE  60
NETETEHREP QGQRTGKGDN KDESQLTDTK PRKTIGERNA RHGSAAANAK TTATSRHRRS  120
GRVKSRENLE NPSDTKDREN PENPVETRER DVANERETAG EEENTAAGGT KQREAVEVEE  180
ETGAEAEKAA REGRAMRARG KGEGDGDKEL GEREGSRRTS EEDGKAEGKE TGEQEGSQRR  240
TVEDEDRAAV EMKESPAVKA TTVAANTEPK TGNGTEEREG TQGTHAADMQ AVTGEATQDR  300
TADAKPDEQV LVEGRAQAED RAAEGNTTAI AQTGRAKGRD DNADRRSHEG NKQGGGKDGR  360
NRREQRQPEV DENREPEEKE QREEHEVGED RRAETEAGEV RPDPDGGAMV GQAQPGGKGE  420
EKERGLEETA LRGEDQPGGK GEEEEEEQVP EDAVHGEQKD IDEEDQHPQR GDTVQRPRHA  480
NGRGRPLRGD ADRERPHRDD TAEGNNDHDE QSEHQEVRRR CVKNNDRMEG WKAISGSAVE  540
RGGRWSEHSP SNSPRPSERS RHAHLPPHLQ PLPDKDDEEG DDRWSRTVPL GSGSTQEWAA  600
TELFGSRDGG KGQSYTELLQ KGLSDTDGDG GVNLSFGLGS GRSAVISQTV VVNPHPDDDG  660
SDVTAVQRSP RSPAPLREAS GNNNDPPRQQ FRSPSVCRGA SARPQWMQSP SPLSAGLSAG  720
RRVGECRETA PVVADVGDAR DEREVWAEQR RLMRSVREES ITRGVQRLRV GEDGHDGEEA  780
GADAHDPDWN DNGAEGWEDD AGNISPSKQA AAMGGRGGKT KSCGGNGRRG KRTAGKGSDA  840
EGDVDGEGGC HFWSVDDIIA LIRAKRDQDA HLQGMGHAYT RMKPREWKWL DVATRLKKVG  900
VDREVDRCGK KWDNLMQQFK KVHHFQGLTG KHDFFQLSGK DRMSKGFSFN MDRAVYDEIL  960
GSTAKNHTIN PKNVADTGAQ GGVRLLSASS PDPESVGDGD GGAEHDDDDD GSTKGSSQMT  1020
GGAGGFDKRK STRQQTFEAM MECMEKHGAL MVSTKESNNK RHCSIAIRQC EALEAEIEVQ  1080
KKHYAASDEV SKLMCHALLE IAKAIGKPGG GSPAGMVARA GYAVGGGGSN AGEGATTGVK  1140
AGDIPGKGDD DDPLVNRLRQ RNTREGMEAA AKLWVDDLRF WNEREGFAIV KLIAEARGYL  1200
VVVARGEQPP PIRRSIVFPH NSIPQHEIAD GSELNAAKER ALKVQGIALR VIHGWVFKSQ  1260
NRQRGYHAAY QYALNHAATD IARSMWMGED WRYCVSPMVV HHTLDMDMKL PLWFVGADVE  1320
DRHEDDGLAA Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	4e-08	Trihelix family protein