PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG67568.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 470aa    MW: 51980.2 Da    PI: 9.5333
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG67568.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix27.39.2e-092352881770
    trihelix  17 meerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 
                 + ++++r k k+  We+ sk+m+  g    +  C +kw+nl + ykki++ ++ 
  GBG67568.1 235 LSHNYGRMKTKEWNWEDMSKRMANAGRPTDADDCMKKWDNLFQNYKKIQRFQNA 288
                 456677889***************************************987665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 470 aa     Download sequence    
MADVRRRLPL LVLAVVVFLI VVFLYVCFSW RSWKQQRKRR ASTRRAAGER LMAGMQARPA  60
SAAGQGGVRS SAAEPRRRYD PSMYTHLESW DTPLPPSDEE PEKEELSTLP LASGSTQLWS  120
QTVRADGSAL DGGGEFTSLL HQGLRDDDGG GVDLRRRDEG RRGSDDNDVP IRPLGKTAGR  180
GKGRGRGGVR GRSVGRGGRG GISDDAGKSP TYWSAEDQIL LVRCKQEQDM HLVGLSHNYG  240
RMKTKEWNWE DMSKRMANAG RPTDADDCMK KWDNLFQNYK KIQRFQNASR RPDFFRLTNE  300
ERKEHNFKFR MDRALYNEIH AGIVGNHMIF PPNVADTGSP DGVPLPRRGA GGGESVCSEA  360
AGEGCPDERS SARESDSNVG SGAGGGKRKN ARQQAFESIS DVMERHGALM SSTIESSSKR  420
QCSISTRQCD ILEQEVAIQK AHYAASDETQ RMICQALFEI AAAIRGRSAM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.15e-07Trihelix family protein