PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG67723.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 416aa    MW: 45244.9 Da    PI: 6.5128
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG67723.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix347.8e-11157240280
    trihelix   2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcp 80 
                 W +  +++Li+a+           e++++g+  k+ Wee++k++++ g++++  +C+ +w+n+   yk++++  ++  s+++s ++
  GBG67723.1 157 WAHLDTMTLIRAKGnrhvaraLNSEDIGNGRTSKKAWEEIAKVLAAAGMRKTWLECRTRWRNVWATYKQVTALHRG--SGAQSYWR 240
                 99999*******9944333333334444578****************************************99987..45665665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 416 aa     Download sequence    
MARGRPYGES PEVDARSAGA GAPVGGQGTA VDMQWTVMPS PMPSRDDCRG MGENRSSGGA  60
ACNVDTYMHV EEGFGNDMSS GNTVPVHHPS RDSDVDNGYG GQGTSPQADE GLEPLHANRE  120
QEGCDGRQKP QLSQGETTPS EEGGSQGAAR ARKRGDWAHL DTMTLIRAKG NRHVARALNS  180
EDIGNGRTSK KAWEEIAKVL AAAGMRKTWL ECRTRWRNVW ATYKQVTALH RGSGAQSYWR  240
MTSAERQEKG FNFILRKDWF DLLEVYFWND RSVHPSGCED PGSRFEEGHN CSPFGAPAER  300
TASPATAPSE GADAAASDSA HTEGARDSVP SLSYKKTQTA QNARDKSMKE LGGWMREQTG  360
ALKHHTNTTL QCAELTVSVI DRQSATAAAV QRDCAQLIAE KMEFGWKVIA DLVRES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.11e-07Trihelix family protein