PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG67912.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 445aa    MW: 48510 Da    PI: 8.6321
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG67912.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix401e-12190260265
    trihelix   2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkik 65 
                 W+ + + aLi+a+r+ + +l+       r k ++ +W +v+ ++++ g+ r++ +C +kw+nl +++kk+ 
  GBG67912.1 190 WSVNNIIALIRAKRDQDAHLQgmghayaRMKPREWKWLDVATRLKKVGVDREADRCGKKWDNLMQQFKKVH 260
                 9999**********777766643333336789999**********************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 445 aa     Download sequence    
MVVLRTSRSP PPLREASRNN RDPPSQQFRS PFVSTGASAR PQWMHSLSPL SAGSSAGRCL  60
GECGETARGI ADVGDARDGR EVWAEQRRLM RSGREESITR GVQRLRVGEH KHDGEEAVAD  120
AHNPDWNDNG AEGGEDNAGY VSPSKQAAVM GGRGGKTKSC ADNGRRGKKA AGKGSDAEGD  180
VDGEGGRQFW SVNNIIALIR AKRDQDAHLQ GMGHAYARMK PREWKWLDVA TRLKKVGVDR  240
EADRCGKKWD NLMQQFKKVH YFQGLSGKPD FFQLSGKDKM SKGFNFNMDR AVYDEILGST  300
AKNHTINPKN VADTCAQGGV RLPSASSADP ESVGDGDGGA EHDDDDDGPM KGSSQTTGGA  360
SGFGKRKSTR QQTFEAMTEC MEKHGALMAS TMESNSKRHC SIAIWKCEAL EEEVKVQKKH  420
YAASDEVSKL MCHTLLEIAK DIAKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.17e-08Trihelix family protein