PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG68023.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 372aa    MW: 40451.6 Da    PI: 9.527
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG68023.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix30.41e-09170243269
    trihelix   2 WtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 
                 Wt +e  +L ++  e++  +++++       k+ + ++++++m+++g+ r+ + C++kw +l+k+ ++i++   
  GBG68023.1 170 WTLEERVLLAKISGEDDALMGDAEgahslmTKGRRYDWIADRMKDEGYARTGEDCRKKWAELQKKVREIRDACD 243
                 99999999999999999999987667778799*********************************999998655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    
MTLLRTIRSP VISGCWRSSS QANGDIAAVL PRLPPRVTVR AAEVRGSDVV DVRGAGGQPI  60
FSFSPLPFPF QLPGRAPPDT SCHVHHRGAS APTVIVIKGR DSFRVDSVPT QGEGRNGSNT  120
CATQDTSARS REIQCGVDDG GTGRLPKERG AGERRQGGKS TAAPKKNTLW TLEERVLLAK  180
ISGEDDALMG DAEGAHSLMT KGRRYDWIAD RMKDEGYART GEDCRKKWAE LQKKVREIRD  240
ACDGSGKQPY WDVTTEERKK LNILMTFERP LWDAMEWYRL KAAFTMDNTM ASEDLRGMGS  300
AAGSEAGFEG GGTETSGGAP KTRRTNSRKV RGSDVGQGVT AMAAAMEDMS RTLCEGPDRA  360
ARTPRHCVPL RV