PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG68242.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 341aa    MW: 36392.6 Da    PI: 7.6921
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG68242.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix28.93.1e-09192273279
    trihelix   2 WtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstc 79 
                 W  +e  aL+++  +++     ++      +++ ++e++sk m+++g++rs++ C++kw +l  + k+i++  ++  s+ +s +
  GBG68242.1 192 WAPDEQIALVRLFGKDDALCACASgphrcmKRQDQLEWISKCMKAEGYRRSAEDCRKKWASLLEKVKEINDKCGR--SGGESYW 273
                 66666667777666666666643333444488999******************************9999998887..4455455 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MEDQHPGSTD DRRSMRMTSL PREYSSATWG SLFANSLPPT HLAEQPHLTG LRAKLHCRTS  60
NSSDTFAGQP TVHHGGMPLY QPPPTSQFRA PTPSPSVSAG VEFGSSPGLP ASPPTAMPRQ  120
SNSGPNVPLS QNEVPCVPYS STSAARVGTP AVDCTPAAAS EDTPSMVTEG GGQDAGGGKA  180
PAKSARKASQ PWAPDEQIAL VRLFGKDDAL CACASGPHRC MKRQDQLEWI SKCMKAEGYR  240
RSAEDCRKKW ASLLEKVKEI NDKCGRSGGE SYWDMAKEKR REAGVHPVFN KALWDAMEWN  300
MKKPSMTCDN TLASDSMQST NEDVRAGGSG DGEGSAGGVG R