PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG68387.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 590aa MW: 64087.7 Da PI: 8.37

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG68387.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	35.5	2.6e-11	334	411	2	71
trihelix 2 WtkqevlaLiearremeerlrrg.......klkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekkr 71 W +e l+L++ +r+++e + ++ k k +W e++k+m ++g+ +r + C ++wen+ + ykki ++ek+ GBG68387.1 334 WHLDESLVLVRCKRDLDEYMASQgsnfarmKTKTWKWNEIAKRMVHQGVtNRDGESCMKRWENIFGWYKKIWDREKDS 411 99**********887777753222333379999*****9999879********************99973 PP

Sequence ? help Back to Top
Protein Sequence Length: 590 aa Download sequence
MADLLWKTAL LSILLVALLI VIVVQLCQLL RQCRARPRKK QTKKDCGGRR VRKGMGDDNL 60 HGGHMYGMGS APTNGVPDRM RQRFDPALYA HLPSYMQPLP DDEDWVPPPS TLPLAWGSTQ 120 TSYETGGRSG DRGTGMGPMS TLLTGGGGAG VDPLQLHLSP SCGMDASRTV LVEHSSRSQG 180 GVSVTMQDAR EDGPHTQRPA RSSSACTSSH SRPPGFTTPV GTGVPHAVVD GRVTTATAAK 240 SPQVIERIKA HYSRMRTDVQ RDDGGDTCGD GEDVAEDCTD DDDESDDDGE PAVKEPTSKG 300 GKNKASKSRA KSKAREKGGG ADGEGGGGST RQNWHLDESL VLVRCKRDLD EYMASQGSNF 360 ARMKTKTWKW NEIAKRMVHQ GVTNRDGESC MKRWENIFGW YKKIWDREKD SGVQSFFVLT 420 SKKRKELGFK FAMDRQLYDA IHATTPNNQA IHPPNLHDTG GLPPQQANEG DQSQPRGPTA 480 VGETSASDNM ESGAGDGYGN RSSGGTPAGK RKNARQMAFD AVANVMKTHS TAVAESVDRA 540 SKRQCDVLQR QCDIMEREAR MQEKQCEVLD AGQRMLCDAL LKIASALSRS

Sequence ? help Back to Top

Protein Sequence Length: 590 aa Download sequence

MADLLWKTAL LSILLVALLI VIVVQLCQLL RQCRARPRKK QTKKDCGGRR VRKGMGDDNL  60
HGGHMYGMGS APTNGVPDRM RQRFDPALYA HLPSYMQPLP DDEDWVPPPS TLPLAWGSTQ  120
TSYETGGRSG DRGTGMGPMS TLLTGGGGAG VDPLQLHLSP SCGMDASRTV LVEHSSRSQG  180
GVSVTMQDAR EDGPHTQRPA RSSSACTSSH SRPPGFTTPV GTGVPHAVVD GRVTTATAAK  240
SPQVIERIKA HYSRMRTDVQ RDDGGDTCGD GEDVAEDCTD DDDESDDDGE PAVKEPTSKG  300
GKNKASKSRA KSKAREKGGG ADGEGGGGST RQNWHLDESL VLVRCKRDLD EYMASQGSNF  360
ARMKTKTWKW NEIAKRMVHQ GVTNRDGESC MKRWENIFGW YKKIWDREKD SGVQSFFVLT  420
SKKRKELGFK FAMDRQLYDA IHATTPNNQA IHPPNLHDTG GLPPQQANEG DQSQPRGPTA  480
VGETSASDNM ESGAGDGYGN RSSGGTPAGK RKNARQMAFD AVANVMKTHS TAVAESVDRA  540
SKRQCDVLQR QCDIMEREAR MQEKQCEVLD AGQRMLCDAL LKIASALSRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	2e-06	Trihelix family protein