PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG68452.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 751aa MW: 81287.8 Da PI: 6.7757

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG68452.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	34.8	4.3e-11	41	116	2	70
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 W+ + aLi+a+r+ + +l+ r k ++ +W +v +++++ g+er++ C +kw+nl +++kk+ + ++ GBG68452.1 41 WSVDDMVALIRAKRDQDAHLQgmgttyaRMKPREWKWLDVEQRLKKVGVEREADWCGKKWDNLMQQFKKVHHFQGL 116 999999******7777777444333356899999*******************************9887665 PP

Sequence ? help Back to Top
Protein Sequence Length: 751 aa Download sequence
MGGNGGRAKA SVRNGRWGKK PMGKGSDVEA DGDAEGGRHF WSVDDMVALI RAKRDQDAHL 60 QGMGTTYARM KPREWKWLDV EQRLKKVGVE READWCGKKW DNLMQQFKKV HHFQGLSGKQ 120 DFFQFIGKER LSKGFSFNMD RAVYDEILGS TSKSHTINPK NVADTGAPGG VRLPSANSGD 180 RESVGDRDAA AWLDDDDDGS TRDAEDWVAE GDDSHGESDF AESEEIPMKR KSSRRQIRAL 240 RIDDVGERRS TGGRGASQQD ANVAARPAMG RARGSASTQQ NRAPLPHVNE PPAAQEVFLC 300 SRMPSTLRQT TATEVGIAAQ GIAQGIASRS PAHDDRGAST VVAARTAEVP KAGAATAGGA 360 SQAGEGGRSG GAATVGASDA VEGARAGGGN AGEGSRAGAV AGVGEDDEAL ANRVRQRSAR 420 EGIDLACKLW VDDIRFSNET EGNAIVKLMQ EARLYLVAVA RGVQPPAIRR SIVLPHTTIP 480 QHKIDDKSEF SAAQDRALKV QTIALRVIHG WLFKSASRQR GYHAAYGYAL NHAATDIVRT 540 IWMGEDWRVC VSAMVFHNTL DMDMKLPLWF VSAYIEDRHE DDELAAYQEA SVQRLVGGFT 600 SAVSTAEGVD GGRVSHERLK SVAEAMQVML AATMWLMRMG GDDRRAHYDA WVFVQLTAKP 660 TLTASMHRSF DARRHIVQAA TAITDKLVKP PINLLAPPVY IPDWASIGVK FSHDATLSSP 720 MEAQKLDWLG TRPPEDDDDA AVNDDMSAGG S

Sequence ? help Back to Top

Protein Sequence Length: 751 aa Download sequence

MGGNGGRAKA SVRNGRWGKK PMGKGSDVEA DGDAEGGRHF WSVDDMVALI RAKRDQDAHL  60
QGMGTTYARM KPREWKWLDV EQRLKKVGVE READWCGKKW DNLMQQFKKV HHFQGLSGKQ  120
DFFQFIGKER LSKGFSFNMD RAVYDEILGS TSKSHTINPK NVADTGAPGG VRLPSANSGD  180
RESVGDRDAA AWLDDDDDGS TRDAEDWVAE GDDSHGESDF AESEEIPMKR KSSRRQIRAL  240
RIDDVGERRS TGGRGASQQD ANVAARPAMG RARGSASTQQ NRAPLPHVNE PPAAQEVFLC  300
SRMPSTLRQT TATEVGIAAQ GIAQGIASRS PAHDDRGAST VVAARTAEVP KAGAATAGGA  360
SQAGEGGRSG GAATVGASDA VEGARAGGGN AGEGSRAGAV AGVGEDDEAL ANRVRQRSAR  420
EGIDLACKLW VDDIRFSNET EGNAIVKLMQ EARLYLVAVA RGVQPPAIRR SIVLPHTTIP  480
QHKIDDKSEF SAAQDRALKV QTIALRVIHG WLFKSASRQR GYHAAYGYAL NHAATDIVRT  540
IWMGEDWRVC VSAMVFHNTL DMDMKLPLWF VSAYIEDRHE DDELAAYQEA SVQRLVGGFT  600
SAVSTAEGVD GGRVSHERLK SVAEAMQVML AATMWLMRMG GDDRRAHYDA WVFVQLTAKP  660
TLTASMHRSF DARRHIVQAA TAITDKLVKP PINLLAPPVY IPDWASIGVK FSHDATLSSP  720
MEAQKLDWLG TRPPEDDDDA AVNDDMSAGG S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	5e-09	Trihelix family protein