PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG68667.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 568aa MW: 61211.6 Da PI: 6.7061

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG68667.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	30.7	8.4e-10	333	385	17	69
trihelix 17 meerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 ++++++r + k+ +We+++k+m+ g + + C +kw+n+ + ykki++ ++ GBG68667.1 333 LGHNYGRMRTKEWKWEDIAKRMANAGRPKDADDCMKKWDNIFQNYKKIQRFQN 385 3455667899*************************************987655 PP

Sequence ? help Back to Top
Protein Sequence Length: 568 aa Download sequence
MASMQVRVVP PAAEGGRRPP TTEPSRRYDP SMYSHLPSWE TPLPPSDEEP EGDELPTFPL 60 ASGSTQLLSQ TVLAGGSANN GRGEYTTLLQ QGLGDDDDGG VDLRLGLSSG GGREASDTFI 120 IDADPSPRGV QQSGSRHTKQ STLRGGASVC VGVRPSSAGR QHGSSAPSAD RLTSTCPERN 180 GVAIGSLRIG GTLHSMPKST TPTQPDLRDD GTCTEAVRPT PNVENITRGV SNVRAHSDGG 240 DDDGGGGDDA NGRFGEDVEA GDDDDDIPIR PLGKTGGRGR GRSRGVVRGR SVGRGGRGGV 300 SDDGGKSKTY KSPEEQIQLV RCKREQEMHL AGLGHNYGRM RTKEWKWEDI AKRMANAGRP 360 KDADDCMKKW DNIFQNYKKI QRFQNASGRP DFFRLSNEER KEHYFKFRME RALYNEIRIG 420 MVGNHTIFPP NIVDIGSPDG VHLPRRGAGA GESVGSEGAG EGLPEERSTT RDSDNNAASG 480 AGGGKWKNAR QQALESIADV MDRHGELMSS TIESSSKRQC SIFTRQCDIL EQEVAVQKVH 540 YAASDEMQRM MCHALMEIAA AIRGRLAT

Sequence ? help Back to Top

Protein Sequence Length: 568 aa Download sequence

MASMQVRVVP PAAEGGRRPP TTEPSRRYDP SMYSHLPSWE TPLPPSDEEP EGDELPTFPL  60
ASGSTQLLSQ TVLAGGSANN GRGEYTTLLQ QGLGDDDDGG VDLRLGLSSG GGREASDTFI  120
IDADPSPRGV QQSGSRHTKQ STLRGGASVC VGVRPSSAGR QHGSSAPSAD RLTSTCPERN  180
GVAIGSLRIG GTLHSMPKST TPTQPDLRDD GTCTEAVRPT PNVENITRGV SNVRAHSDGG  240
DDDGGGGDDA NGRFGEDVEA GDDDDDIPIR PLGKTGGRGR GRSRGVVRGR SVGRGGRGGV  300
SDDGGKSKTY KSPEEQIQLV RCKREQEMHL AGLGHNYGRM RTKEWKWEDI AKRMANAGRP  360
KDADDCMKKW DNIFQNYKKI QRFQNASGRP DFFRLSNEER KEHYFKFRME RALYNEIRIG  420
MVGNHTIFPP NIVDIGSPDG VHLPRRGAGA GESVGSEGAG EGLPEERSTT RDSDNNAASG  480
AGGGKWKNAR QQALESIADV MDRHGELMSS TIESSSKRQC SIFTRQCDIL EQEVAVQKVH  540
YAASDEMQRM MCHALMEIAA AIRGRLAT