PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG68702.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 211aa    MW: 24560.5 Da    PI: 4.1516
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG68702.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix34.36.1e-111699179
    trihelix  1 rWtkqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstc 79
                rW + e+  L ++r+e++  ++++        lk++ W+ v ++mre+g+ r+   Ck+k++++  + +k+k++e++  s+++s +
  GBG68702.1 16 RWGDTETDWLCQFRNEVKVLMGEETeqygcsrLKAGFWKIVEQRMREKGYIRKDDLCKNKFNQILEYCRKLKAHERR--SGRESYW 99
                8**************88888887433344444********************************************8..4555455 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MGLPLRSGSP PINTERWGDT ETDWLCQFRN EVKVLMGEET EQYGCSRLKA GFWKIVEQRM  60
REKGYIRKDD LCKNKFNQIL EYCRKLKAHE RRSGRESYWD INKARRKRYN VDFMLKRSWY  120
DIIDPVEKDK DSIDLSNLMD SGADEERLEH FKDRPRFDVH GDDDDDDDDD DDDDDDGGGG  180
GDDDDDDDDD DGGGGGNDDN NDEVLALDLE R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G25990.13e-07Trihelix family protein