PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG68913.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 234aa    MW: 25989.1 Da    PI: 7.1665
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG68913.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix26.51.7e-084512067
    trihelix 20 rlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikeg 67
                ++ r k ++ + ++v+++++  g+ r +++C +kw+nl +++kk+ + 
  GBG68913.1  4 EYARMKPREWKRQDVAQRLKNVGVDRDAEKCGKKWDNLMQQFKKVHHF 51
                55566666666678******************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MGHEYARMKP REWKRQDVAQ RLKNVGVDRD AEKCGKKWDN LMQQFKKVHH FQSLSGGDYF  60
FQLSAKERAS EGFNFTMDRV VYDEIEGSTG RNHTINPKNM ADTGASGGVR LPSTSNADPE  120
SVADGDGGVG REDDNKGSTR GSSQMTGTLA GFGKRKSMRQ QTFEALMECM EKHGALMAST  180
MESASKRQCS IQVPQCQELE AEVEVQGKHY AASDEVSKLM CHALLEIAKA IREQ