PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG69120.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 483aa MW: 51858.6 Da PI: 7.5043

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG69120.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	26.6	1.5e-08	275	321	25	71
trihelix 25 klkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr 71 k k+ +W ++ k+m+++g+ r++ +C+++wen+ + yk i ++ ++ GBG69120.1 275 KTKEWKWLDIEKRMEAQGVMRTSSKCRKRWENMFMWYKHILDNHEDL 321 578899********************************998887764 PP

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence
MPSVVRIAVL IAVLSLVLLV IVLLRFLQFV GSVRRRGVKG GAPRSASKRK AVKAGGKKGS 60 MVRLTLCGSD ANAGWNMPTG QQRLDPAAYA HLPSYLQPLP DDDMVDLSTA GPFSSQLELD 120 TDLRLSASAT EPTECFTSLS IAAPRATRTN VNTPARSTVS TAGGGGLHGG GVRIRVGSSA 180 FRSLGSGSAS VFNNDVPRQP STTPMESGGG SEGPAMGRVD CVVPDDVEGD GEPPASPAAL 240 AQSATGHPGD VGQESTGVAS EKGGADAAKA DGMMKTKEWK WLDIEKRMEA QGVMRTSSKC 300 RKRWENMFMW YKHILDNHED LSGMATFWKL TAKQRREKGF KFFLDRELWD AIHAGQDGNQ 360 TINPTNLADT GKRPVDNADS EGEEGEDMST DCASTSQGSR HGKKKTAREQ AFAVVGEVMK 420 EHSAVVAESV DRASKRQCEF MDRQCTVLER ELDIHERQLQ LADVGQKLLC DALMKIAEAL 480 SKP

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence

MPSVVRIAVL IAVLSLVLLV IVLLRFLQFV GSVRRRGVKG GAPRSASKRK AVKAGGKKGS  60
MVRLTLCGSD ANAGWNMPTG QQRLDPAAYA HLPSYLQPLP DDDMVDLSTA GPFSSQLELD  120
TDLRLSASAT EPTECFTSLS IAAPRATRTN VNTPARSTVS TAGGGGLHGG GVRIRVGSSA  180
FRSLGSGSAS VFNNDVPRQP STTPMESGGG SEGPAMGRVD CVVPDDVEGD GEPPASPAAL  240
AQSATGHPGD VGQESTGVAS EKGGADAAKA DGMMKTKEWK WLDIEKRMEA QGVMRTSSKC  300
RKRWENMFMW YKHILDNHED LSGMATFWKL TAKQRREKGF KFFLDRELWD AIHAGQDGNQ  360
TINPTNLADT GKRPVDNADS EGEEGEDMST DCASTSQGSR HGKKKTAREQ AFAVVGEVMK  420
EHSAVVAESV DRASKRQCEF MDRQCTVLER ELDIHERQLQ LADVGQKLLC DALMKIAEAL  480
SKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	1e-07	Trihelix family protein