PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG69201.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 966aa MW: 103287 Da PI: 6.2459

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG69201.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	37.3	7.3e-12	231	306	2	70
trihelix 2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 W+ + aLi+a+r m+++++r k ++ +W +v +++++ g+er++++C +kw+nl +++kk+ + ++ GBG69201.1 231 WSVDDMVALIRAKRdqdahvpGMGTAYGRMKPREWKWLDVEQRLKKVGVEREAERCGKKWDNLMQQFKKVHHFQGL 306 999999******66666666777777889************************************9887665 PP

Sequence ? help Back to Top
Protein Sequence Length: 966 aa Download sequence
MDGRQAVCRS AGGEGGGQGP EQSLSRGSRA VERSKYAHLP PHLQPLPDTS DEEEDGRRSR 60 VVPLGSGSTQ EWTATEICGS REPSYGQSYT QLLQQGLSGD EGDGGVNLTF GLCSGRSSSS 120 TRTVLVDNSP DDDGGQVTVV ARPSKFPASH LPCVVLPTPA VKVVQVLIVA ADIRGDGDNI 180 HDGRAEASLE ADGALYCCVR GSLLFPDAKK SMGKGSDVEA DGNAEGGCHF WSVDDMVALI 240 RAKRDQDAHV PGMGTAYGRM KPREWKWLDV EQRLKKVGVE REAERCGKKW DNLMQQFKKV 300 HHFQGLSGKQ DFFQFTGKER LSKGFSFNMD RAVYDEILGS TAKSHTINPK NVADTGAPGG 360 VRLPSANSSD PESVGDRDAA AGLDDDDDGS TRGSSQPTGC PAGFGKRKST RQQTFDALSE 420 CMEKHGALVA STMESNSKRQ CSIQIQQCEA LEAEVEVQKK YYAASDEVSK LMCHALLEIA 480 KAIREHAEDW VAEGDDSHGE SDFAESEEIP MKRKSSRRQI GALRIDDVAE RRSAGGRGAS 540 QQDANVAARP VTGRAGGSVA TQQNRAPLPR VNEPPAAQEV FVRGRTPSTP RQTTATEVGV 600 AAQGIAQGIA NRSPAHDNRG ESTVVAARAA EVPKAGAATA GGASQAGEGG RSGGAANVGA 660 SHAVEGARAG GGNAGEGRRA GAVARVGEDD EALENRVWQR SACEGIDVAS KLCVDDIHFW 720 NETEGNTIVR LMQEARLYLV AVARGVQPPA IRRSIVLPHT TIPQHKIDDE SEFSAAQYRA 780 LKVQTIALRV IHGHKDDELA AYQEASVQRL VGAFTSAVST AEGVDGRRVS HERLKIVAKA 840 MWVMLATTMW LMRMGGDDRR AHYDAWVFVQ LTVKPTLIAS MHRSFDARHH IVQAATAITD 900 KLAKPPITLL APPVYIPDWA SIGVKFSHDA TLSSPMEAQK LDWLGTGPPE DDDDAAVNDH 960 MSAGGS

Sequence ? help Back to Top

Protein Sequence Length: 966 aa Download sequence

MDGRQAVCRS AGGEGGGQGP EQSLSRGSRA VERSKYAHLP PHLQPLPDTS DEEEDGRRSR  60
VVPLGSGSTQ EWTATEICGS REPSYGQSYT QLLQQGLSGD EGDGGVNLTF GLCSGRSSSS  120
TRTVLVDNSP DDDGGQVTVV ARPSKFPASH LPCVVLPTPA VKVVQVLIVA ADIRGDGDNI  180
HDGRAEASLE ADGALYCCVR GSLLFPDAKK SMGKGSDVEA DGNAEGGCHF WSVDDMVALI  240
RAKRDQDAHV PGMGTAYGRM KPREWKWLDV EQRLKKVGVE REAERCGKKW DNLMQQFKKV  300
HHFQGLSGKQ DFFQFTGKER LSKGFSFNMD RAVYDEILGS TAKSHTINPK NVADTGAPGG  360
VRLPSANSSD PESVGDRDAA AGLDDDDDGS TRGSSQPTGC PAGFGKRKST RQQTFDALSE  420
CMEKHGALVA STMESNSKRQ CSIQIQQCEA LEAEVEVQKK YYAASDEVSK LMCHALLEIA  480
KAIREHAEDW VAEGDDSHGE SDFAESEEIP MKRKSSRRQI GALRIDDVAE RRSAGGRGAS  540
QQDANVAARP VTGRAGGSVA TQQNRAPLPR VNEPPAAQEV FVRGRTPSTP RQTTATEVGV  600
AAQGIAQGIA NRSPAHDNRG ESTVVAARAA EVPKAGAATA GGASQAGEGG RSGGAANVGA  660
SHAVEGARAG GGNAGEGRRA GAVARVGEDD EALENRVWQR SACEGIDVAS KLCVDDIHFW  720
NETEGNTIVR LMQEARLYLV AVARGVQPPA IRRSIVLPHT TIPQHKIDDE SEFSAAQYRA  780
LKVQTIALRV IHGHKDDELA AYQEASVQRL VGAFTSAVST AEGVDGRRVS HERLKIVAKA  840
MWVMLATTMW LMRMGGDDRR AHYDAWVFVQ LTVKPTLIAS MHRSFDARHH IVQAATAITD  900
KLAKPPITLL APPVYIPDWA SIGVKFSHDA TLSSPMEAQK LDWLGTGPPE DDDDAAVNDH  960
MSAGGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	1e-09	Trihelix family protein