PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG69614.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

G2-like

Protein Properties

Length: 1260aa MW: 134275 Da PI: 6.5014

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG69614.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.4	1.4e-32	303	357	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWtpeLH+rFv+av++LGG+ekAtPk +l++m+v+gLt+ hvkSHLQkYR+ GBG69614.1 303 KQRLRWTPELHDRFVDAVDELGGAEKATPKGVLKVMNVQGLTIFHVKSHLQKYRM 357 79****************************************************8 PP
2	Myb_DNA-binding	49.3	1.1e-15	305	356	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e+++++vdav +lGg t+k + + m+ +g+t ++ks++qky+ GBG69614.1 305 RLRWTPELHDRFVDAVDELGGAekaTPKGVLKVMNvQGLTIFHVKSHLQKYR 356 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 1260 aa Download sequence
MPQPESSRVS AADPLASARC ADSSPSPPPS CWSPSPSAAA AAAGVASSDP DVGGRPRGGG 60 EVIGGGGEDG SSRNCGVDGE EFVPAASSAA AAAVSAGDAS SPFRCASSPG CGGDRSQSLV 120 PIPPQHRCLL QTSAPDEAPG PVLGEEMASL ADVSDSGHPA LPTSSTQTSA AGNDDSASLD 180 TDVVAHSEWP TWWEFYPEAH ALEPVWAELL NVSQMEADDG EEEEQRGVEG GGGATVNNVS 240 QHHSSNTSVF QESEKAMSGV DGATVTRDKT GGERHRVPGG GRSLIPGMPA GPLSPGAGVA 300 NGKQRLRWTP ELHDRFVDAV DELGGAEKAT PKGVLKVMNV QGLTIFHVKS HLQKYRMAKF 360 MPEQQVMPND NEDSGAVCSS FGAAGSPGKG DGKVKGKTAT ELTAPQDPRK CQTQDLKNHL 420 NVQKKLHEQL ELQRQLQMKV QATGKHLHMI LKQYRILCAQ TERTQRELAR SSNGDAPLPK 480 GSSDVLRPSG SADGSSSGGQ GGSLSAMGGS MMPMNIVEEG DSVNAAMSLP VCCSHSQLSS 540 QLSPVDEQAG GQFVQASQND YTSFINSAEP SYSQQNQAIP MLEDDLFTQE QRLPKQCHCQ 600 QHESPPSVYY PTEQQSLRGQ SQQQYENSQG GGPRTKAKYH HHNCGYQVPL QALSGKNQAM 660 GVTQQQQQQQ QQQQEQQQQQ QQQQQQQQQQ QQQQVTENHR ECEVVCLPSA RAVISSAPGR 720 CDHVCVSQLK RLKHDNVQGM PSSVPSGQGL GSGLSRRTVY YQQQLTSSMM PTLDNSIPPL 780 YNGGASHHQQ DGSNMQVPVG VEELDEDPSL LAYAGSGSFL GAAEHRICAM DAAATTMGVG 840 RVEMTGPMGL VPECQTITRG LENHATEGSG AGMGRVCVTC APGCSLHHHH TQHVSAPISS 900 CQTCRTSHIQ HPPLHQPKGG VKRKPAPTMA VMNPSQPSSA QCSFPCRQHQ SCLQHQQQQQ 960 QQQQQQQQQQ QQLLQPNFGT GSALSTSERG GEGRGQFNRH SVPPVSSAQQ RKQQHNQQSQ 1020 PQQQAQLRNE PLHDQRPQSR SSAGANLQQP QHVHAAGSYG LGSSPQLMAS GITTFYRTHS 1080 RGDDDRPCAS PKESACQQFS SGTRSQRMMA QGDEHGHVNC SPASGSEVGE LRGELRDFSG 1140 SMDLSESMAT KDIREAANDG IGLQRMDCTT GAAAAQSGDY SSPCFGENRW SVGRCADRAR 1200 APSLRDSSAS SNERKFAGIV PVDCGCGAPR SFGRENDLPD RPSSQALVNA EVRYHKARLA

Sequence ? help Back to Top

Protein Sequence Length: 1260 aa Download sequence

MPQPESSRVS AADPLASARC ADSSPSPPPS CWSPSPSAAA AAAGVASSDP DVGGRPRGGG  60
EVIGGGGEDG SSRNCGVDGE EFVPAASSAA AAAVSAGDAS SPFRCASSPG CGGDRSQSLV  120
PIPPQHRCLL QTSAPDEAPG PVLGEEMASL ADVSDSGHPA LPTSSTQTSA AGNDDSASLD  180
TDVVAHSEWP TWWEFYPEAH ALEPVWAELL NVSQMEADDG EEEEQRGVEG GGGATVNNVS  240
QHHSSNTSVF QESEKAMSGV DGATVTRDKT GGERHRVPGG GRSLIPGMPA GPLSPGAGVA  300
NGKQRLRWTP ELHDRFVDAV DELGGAEKAT PKGVLKVMNV QGLTIFHVKS HLQKYRMAKF  360
MPEQQVMPND NEDSGAVCSS FGAAGSPGKG DGKVKGKTAT ELTAPQDPRK CQTQDLKNHL  420
NVQKKLHEQL ELQRQLQMKV QATGKHLHMI LKQYRILCAQ TERTQRELAR SSNGDAPLPK  480
GSSDVLRPSG SADGSSSGGQ GGSLSAMGGS MMPMNIVEEG DSVNAAMSLP VCCSHSQLSS  540
QLSPVDEQAG GQFVQASQND YTSFINSAEP SYSQQNQAIP MLEDDLFTQE QRLPKQCHCQ  600
QHESPPSVYY PTEQQSLRGQ SQQQYENSQG GGPRTKAKYH HHNCGYQVPL QALSGKNQAM  660
GVTQQQQQQQ QQQQEQQQQQ QQQQQQQQQQ QQQQVTENHR ECEVVCLPSA RAVISSAPGR  720
CDHVCVSQLK RLKHDNVQGM PSSVPSGQGL GSGLSRRTVY YQQQLTSSMM PTLDNSIPPL  780
YNGGASHHQQ DGSNMQVPVG VEELDEDPSL LAYAGSGSFL GAAEHRICAM DAAATTMGVG  840
RVEMTGPMGL VPECQTITRG LENHATEGSG AGMGRVCVTC APGCSLHHHH TQHVSAPISS  900
CQTCRTSHIQ HPPLHQPKGG VKRKPAPTMA VMNPSQPSSA QCSFPCRQHQ SCLQHQQQQQ  960
QQQQQQQQQQ QQLLQPNFGT GSALSTSERG GEGRGQFNRH SVPPVSSAQQ RKQQHNQQSQ  1020
PQQQAQLRNE PLHDQRPQSR SSAGANLQQP QHVHAAGSYG LGSSPQLMAS GITTFYRTHS  1080
RGDDDRPCAS PKESACQQFS SGTRSQRMMA QGDEHGHVNC SPASGSEVGE LRGELRDFSG  1140
SMDLSESMAT KDIREAANDG IGLQRMDCTT GAAAAQSGDY SSPCFGENRW SVGRCADRAR  1200
APSLRDSSAS SNERKFAGIV PVDCGCGAPR SFGRENDLPD RPSSQALVNA EVRYHKARLA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	53	60	GGRPRGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	4e-29	G2-like family protein