PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG69787.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Nin-like

Protein Properties

Length: 838aa MW: 84897.9 Da PI: 7.1429

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG69787.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	73.3	3.1e-23	772	818	3	49
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRki 49 ei+l +ls+yF++pi+ A+keL+v+lTvLK++CR++ I+RWPhRk+ GBG69787.1 772 TEITLAELSRYFHMPITMASKELKVGLTVLKKRCRELKIPRWPHRKV 818 68********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 838 aa Download sequence
MMLARNADVV YTRRLAEDLN SANQDLTEAS NSPDPASTTT SNTSQLEVAS VGSPAPPPLR 60 SSGPVKAEPS ASSFSPSALN GSCDEFQSLG SQPQGPSQSQ THTLCGQSRL LCSQPPDLKA 120 ETSNFGRGGG GGGGGGGGGG GGLATAALSS SVSSQTWSGT SIMAVGNLPS SWAEQTEDWA 180 PGPGVHVVGQ HVGGGASCGS AMASGGPDDV HMPGGGMTVD LETSAEINPC TGTVDHLMGT 240 TSWGEMDFAS MQPLLALLSG PSSGVNAIFG KKMPFTQPLQ DPSCGGGGDD GASSPSMMLH 300 HSNGHHHHHP HNAPMAIPLA SIPRSAPANG MLPLHHVHPT STSSSGDTSS PRGSALGTAS 360 DLPLFHIPTS APASHTPSSL ALPLDHQSSS RSEVSSSALT AAARRDAAAA ANPQNHPLFS 420 HHLANILGRL GSQPANLSAA LTASLSDRLA STSGDSCAAD CGGPHHLAAL GGAQHFLHAP 480 RSFGGLGGSG GEGGGGGTGG EGGGGGGGGG GGGGGGCGDA FDLPVVPVAA RFGIGASCWA 540 SQAHSQANSR PGEGGGDSIE HAPAHLLPPS TSACHMSRAS ALMTHQHSSV LALNHQRAQL 600 EGCGPAKLFT SSSIDRDSAD LSPDSANTPH AASDHLHHHH HHHHHHHPQA HSMPPHLHFS 660 ALAAASPPPA PLPTSHHSHP HQHHPGSLLL DGHLASYPRL LSLGVNVKPE PCHGSPLGPC 720 SDISTHAGHG GGSTFPTTSG RFAAAKGLGG TITSSSHHNT KSNPTRPSER MTEITLAELS 780 RYFHMPITMA SKELKVGLTV LKKRCRELKI PRWPHRKVGF PLRCGAAQLL ARIYLFSI

Sequence ? help Back to Top

Protein Sequence Length: 838 aa Download sequence

MMLARNADVV YTRRLAEDLN SANQDLTEAS NSPDPASTTT SNTSQLEVAS VGSPAPPPLR  60
SSGPVKAEPS ASSFSPSALN GSCDEFQSLG SQPQGPSQSQ THTLCGQSRL LCSQPPDLKA  120
ETSNFGRGGG GGGGGGGGGG GGLATAALSS SVSSQTWSGT SIMAVGNLPS SWAEQTEDWA  180
PGPGVHVVGQ HVGGGASCGS AMASGGPDDV HMPGGGMTVD LETSAEINPC TGTVDHLMGT  240
TSWGEMDFAS MQPLLALLSG PSSGVNAIFG KKMPFTQPLQ DPSCGGGGDD GASSPSMMLH  300
HSNGHHHHHP HNAPMAIPLA SIPRSAPANG MLPLHHVHPT STSSSGDTSS PRGSALGTAS  360
DLPLFHIPTS APASHTPSSL ALPLDHQSSS RSEVSSSALT AAARRDAAAA ANPQNHPLFS  420
HHLANILGRL GSQPANLSAA LTASLSDRLA STSGDSCAAD CGGPHHLAAL GGAQHFLHAP  480
RSFGGLGGSG GEGGGGGTGG EGGGGGGGGG GGGGGGCGDA FDLPVVPVAA RFGIGASCWA  540
SQAHSQANSR PGEGGGDSIE HAPAHLLPPS TSACHMSRAS ALMTHQHSSV LALNHQRAQL  600
EGCGPAKLFT SSSIDRDSAD LSPDSANTPH AASDHLHHHH HHHHHHHPQA HSMPPHLHFS  660
ALAAASPPPA PLPTSHHSHP HQHHPGSLLL DGHLASYPRL LSLGVNVKPE PCHGSPLGPC  720
SDISTHAGHG GGSTFPTTSG RFAAAKGLGG TITSSSHHNT KSNPTRPSER MTEITLAELS  780
RYFHMPITMA SKELKVGLTV LKKRCRELKI PRWPHRKVGF PLRCGAAQLL ARIYLFSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35590.1	3e-16	Nin-like family protein