PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG69845.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 1974aa MW: 221762 Da PI: 6.0426

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG69845.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	28.7	3.4e-09	199	275	2	70
trihelix 2 WtkqevlaLiearremeerlrrg.......klkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekk 70 W +e l+L++ +r++++ + ++ k k +W e++k+m+++g+ +r C ++wen+ + y k ++ek+ GBG69845.1 199 WHLDESLVLVRCKRDLDDYMASQgsnfarmKTKTWKWNEIAKRMAQQGVtNRDGDSCMKRWENIFGWYIKFWDREKN 275 99**********777666643222222279999*******999899**************999998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 1974 aa Download sequence
MGPMSTLLTG GRGAGGDPLQ LHLSSTCTMD ASRTVLVEHN SRSQGGVSVT MQEAREDRLQ 60 TQWPPRSSSA CTSSHSRPPT FSTPVSNGVS HTVLNGRVTT AIAAESPRVI ERIIARYSRM 120 RTDVEREDGG DANADGEDVA EECMDGNDES EEDDEPAVKE VTSKGGKKKA SKSRGRSKAR 180 EEGGGAYGES GGGSMRQNWH LDESLVLVRC KRDLDDYMAS QGSNFARMKT KTWKWNEIAK 240 RMAQQGVTNR DGDSCMKRWE NIFGWYIKFW DREKNSGVQS FFLLTSKKCE ELEFTFAMDQ 300 QLYDAIHATT PNNHAIHPPN LLDTDGLPPQ QPNEGEADGQ ARGSAVVGET SASDNIDSAV 360 GDGYGNKSSG RPTPLPRLTS FPSRWKMNNR NEKIKFQVEL PKIKAMDKLM VFEQGTLPSV 420 DWIAEYQCLT SVPDIEMGFK DIKHYFISRS CPALGNALTH IEDTLTTPTE LFDKAAEIIV 480 TNKEAKKLHR SSATGPIRDQ HRPKVVVVVA AMPIDQTSET VSTNEGDRLA AARDGGRPDK 540 GRGRGKTKTN TTSSPGPGAT APAPWSQYGI SEQAYKARTR FRYCLWCNSD LHETMGCPPK 600 GKGKSENVAP PGEEVVARMK EEFREGGLVL GAPNDDATET RPFIVETDAG PTSLGGVLIQ 660 GDKEGKERPL RFESRTLCTT ERNYSQFKRE TLAVLHCLRI FRNYIFGRRF ILRVDPTALA 720 YSLRNYVSSD PTVVRWLTYI WIFNFELERI PGNKNRADGL SRINWDGKEG EAVENTPPVD 780 EFLDQEEDVR LHINKWSPRV PSCVRHPIRQ APSGYERKAE LVLKPFEEED PWGGKDVQWM 840 MKLALAGSHS LVEDMRAIEE GSGQVERHEE LMGGMYLLVN TLLQENLDQA DSLNPAGNED 900 EVPESQDDEF EESEIKEVFR AEEYEGIYLE LGLLLSCEVR LRDASDRAQR MMQRYLVRDG 960 HLFVRREVGN PRRVVCGRNR QIDVIAALHD GIAGGHRGIQ ATYAKISELY YWDGMMDMIG 1020 KFCRSCVPCQ ERSCLRQGEP LHPKLEREVG AIVHLDLLFT PLGDQGYNYI FDARDNLSGF 1080 VDGRAIRTKT GLVLVSCIEE YYLRYPFIRE FVIDRGSEFT CQEVQELLSR SDFTKTAMPR 1140 GGKGTRPPQR PLGASGGYER HGPRHRESTP VYDDGDIELF LDSFWDHARR MGWTVAQAIE 1200 RLGGAGRFEE LIARIRREAM TRPEVEMRMQ ELRPSPVGPD ARPIRLEIGN AADFILAFEW 1260 FMQGQGIPRD DWARTLPLLT RKAERPLARQ IRDMARDWES CRAHLREAFR RPESPRPRVE 1320 RRQRIRRQRD PEPSEARPSR GGRKALARRE EESEPEGEER GAYAKCGLGP VEFHHFTEGG 1380 LRRSPVRTQE EAPASEGPLR ELEAHLDVSR WGTSPRGEER KEVIEVGEDT PPQTPAVGFK 1440 LGDAPGSTRQ AGEGLQREEA PLPSSEKAPS PERRTESKRE IAVVRREALA LIDRHLAAHT 1500 LEHPDLEEPA AAEPRQESCQ PEKEVEAKIP KRVSHRTRER APAGETAEEK RARRSRRIEE 1560 IWQERQRLAA VGALPEQQQE RQGLEAAGTL PDQPPSAPPK APEIPEMRRD FWEQRAEGLP 1620 SPTRAGFEVA RKAEKRLDRK IKFLAKTSFN RYLLVESDLV GKKMKEQGHG LRLETMEVEI 1680 QELRALVASQ ATIIEDLRQQ RQGGADKAES SRQGEQRRPG QGLPGQPSAA EPRQDPPMGR 1740 VILEPEEARA QREAKREAFE FRAPTELATL PIIAAGPVVP LAVEEGQPPS SSEPAQGSAE 1800 GSMDGLLEAV HTMQEEASLF WPEQRIEEPL EREMGIETKG VIEGRPQKLD TPEYGPEGVG 1860 DRPGPSTQEM ETGEEPLDMP QSHELSREAN EAPSSPGSQR GKKRSRKWFD TSCFFCTKEG 1920 HRALQCPKFL KDKAEGKVTK EDGRMYDRHG RRVERSADGG KAQLYRQNQE EMSE

Sequence ? help Back to Top

Protein Sequence Length: 1974 aa Download sequence

MGPMSTLLTG GRGAGGDPLQ LHLSSTCTMD ASRTVLVEHN SRSQGGVSVT MQEAREDRLQ  60
TQWPPRSSSA CTSSHSRPPT FSTPVSNGVS HTVLNGRVTT AIAAESPRVI ERIIARYSRM  120
RTDVEREDGG DANADGEDVA EECMDGNDES EEDDEPAVKE VTSKGGKKKA SKSRGRSKAR  180
EEGGGAYGES GGGSMRQNWH LDESLVLVRC KRDLDDYMAS QGSNFARMKT KTWKWNEIAK  240
RMAQQGVTNR DGDSCMKRWE NIFGWYIKFW DREKNSGVQS FFLLTSKKCE ELEFTFAMDQ  300
QLYDAIHATT PNNHAIHPPN LLDTDGLPPQ QPNEGEADGQ ARGSAVVGET SASDNIDSAV  360
GDGYGNKSSG RPTPLPRLTS FPSRWKMNNR NEKIKFQVEL PKIKAMDKLM VFEQGTLPSV  420
DWIAEYQCLT SVPDIEMGFK DIKHYFISRS CPALGNALTH IEDTLTTPTE LFDKAAEIIV  480
TNKEAKKLHR SSATGPIRDQ HRPKVVVVVA AMPIDQTSET VSTNEGDRLA AARDGGRPDK  540
GRGRGKTKTN TTSSPGPGAT APAPWSQYGI SEQAYKARTR FRYCLWCNSD LHETMGCPPK  600
GKGKSENVAP PGEEVVARMK EEFREGGLVL GAPNDDATET RPFIVETDAG PTSLGGVLIQ  660
GDKEGKERPL RFESRTLCTT ERNYSQFKRE TLAVLHCLRI FRNYIFGRRF ILRVDPTALA  720
YSLRNYVSSD PTVVRWLTYI WIFNFELERI PGNKNRADGL SRINWDGKEG EAVENTPPVD  780
EFLDQEEDVR LHINKWSPRV PSCVRHPIRQ APSGYERKAE LVLKPFEEED PWGGKDVQWM  840
MKLALAGSHS LVEDMRAIEE GSGQVERHEE LMGGMYLLVN TLLQENLDQA DSLNPAGNED  900
EVPESQDDEF EESEIKEVFR AEEYEGIYLE LGLLLSCEVR LRDASDRAQR MMQRYLVRDG  960
HLFVRREVGN PRRVVCGRNR QIDVIAALHD GIAGGHRGIQ ATYAKISELY YWDGMMDMIG  1020
KFCRSCVPCQ ERSCLRQGEP LHPKLEREVG AIVHLDLLFT PLGDQGYNYI FDARDNLSGF  1080
VDGRAIRTKT GLVLVSCIEE YYLRYPFIRE FVIDRGSEFT CQEVQELLSR SDFTKTAMPR  1140
GGKGTRPPQR PLGASGGYER HGPRHRESTP VYDDGDIELF LDSFWDHARR MGWTVAQAIE  1200
RLGGAGRFEE LIARIRREAM TRPEVEMRMQ ELRPSPVGPD ARPIRLEIGN AADFILAFEW  1260
FMQGQGIPRD DWARTLPLLT RKAERPLARQ IRDMARDWES CRAHLREAFR RPESPRPRVE  1320
RRQRIRRQRD PEPSEARPSR GGRKALARRE EESEPEGEER GAYAKCGLGP VEFHHFTEGG  1380
LRRSPVRTQE EAPASEGPLR ELEAHLDVSR WGTSPRGEER KEVIEVGEDT PPQTPAVGFK  1440
LGDAPGSTRQ AGEGLQREEA PLPSSEKAPS PERRTESKRE IAVVRREALA LIDRHLAAHT  1500
LEHPDLEEPA AAEPRQESCQ PEKEVEAKIP KRVSHRTRER APAGETAEEK RARRSRRIEE  1560
IWQERQRLAA VGALPEQQQE RQGLEAAGTL PDQPPSAPPK APEIPEMRRD FWEQRAEGLP  1620
SPTRAGFEVA RKAEKRLDRK IKFLAKTSFN RYLLVESDLV GKKMKEQGHG LRLETMEVEI  1680
QELRALVASQ ATIIEDLRQQ RQGGADKAES SRQGEQRRPG QGLPGQPSAA EPRQDPPMGR  1740
VILEPEEARA QREAKREAFE FRAPTELATL PIIAAGPVVP LAVEEGQPPS SSEPAQGSAE  1800
GSMDGLLEAV HTMQEEASLF WPEQRIEEPL EREMGIETKG VIEGRPQKLD TPEYGPEGVG  1860
DRPGPSTQEM ETGEEPLDMP QSHELSREAN EAPSSPGSQR GKKRSRKWFD TSCFFCTKEG  1920
HRALQCPKFL KDKAEGKVTK EDGRMYDRHG RRVERSADGG KAQLYRQNQE EMSE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	1635	1642	KRLDRKIK