PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG69966.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 1159aa MW: 125816 Da PI: 6.517

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG69966.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	32.9	1.6e-10	200	274	2	69
trihelix 2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 W+ + aL++a+r m+++++ k ++ +We+v +++ + g++r+++ C +kw+nl +++kk+ + ++ GBG69966.1 200 WPVGDTVALVRAKRdqdlyfaGMGHNFGGMKTREWRWEDVRQRLVKLGVQRKAVDCGKKWDNLMQQFKKVHKYQN 274 9999999*****88888888888888899************************************988766 PP

Sequence ? help Back to Top
Protein Sequence Length: 1159 aa Download sequence
MSLLNDGLCE DEANAPVDLR FQLSSSSGAA ATHTRIVKPY PDGGWAEQSS AAPCGRGDDG 60 LSQASGGVGN RNVASTQGGG RGDVCQRRDW TASRSGPGTP LGWQRQDDGS ASGAQVERHG 120 RQSWADARQA LRQAGADTIT RGVQELHVDG GGDAALRNHS TATTDGGASA KKGSTPSNWR 180 NKRRDDDTSG SDGEGGRNFW PVGDTVALVR AKRDQDLYFA GMGHNFGGMK TREWRWEDVR 240 QRLVKLGVQR KAVDCGKKWD NLMQQFKKVH KYQNLSGGKD YFKLASSARR SEGFSFVMDR 300 SVFDEMEAMT KGDHTIHLKN LADTGAPEGV QMPAGTGAVG DDIGSEGGGE PVDEDQGSTK 360 DSRFSGGSGA ATRKRKNMRQ QSFEVVTDVM KDHGTLMATT MDNASKRQCS MMLRQCQVLE 420 SELELQRGHY AVADAANTMM CNALLEIAKA IRDRSVVGGT SFGDRRVTSS ESDRSANVAS 480 SRLRHVIMST RGNARGTKRD TLPEDGEGQL KRGRHVPKGK RLRPEEASGS VPSRIAQGWV 540 AAAERDDDDE YASGEEHAEG TASAVRESGR QRSSDHIASK GMTTPPPAAL RVQGRDTRTE 600 KVTIVDMVNP SDDEPLEKRR LRTATASTPG TPTLPRQPRP DDEGGSAQHV AAGAVVVARG 660 AAGAEAAGAA GGATPGEKNP GREGDDPSSS PHRRGVMTKD LLERALLWVD DTAFWTTREG 720 RRMYNIVHET REYFVAIASG LPARAIPRSV VMPKSSAKVA RISDQSQLQQ ATKRATTLEN 780 VVMRILHVWV FKSGNRPRGY HLAFQYTLES FATDLARVMW CGEEWNNAVS AAVCVHTIDL 840 GMDLPLWFVG ANVDDRPDDD DMAAYQESTM ICIVHAFHGA IQMGATIDQG FILYECLCRV 900 ADCLRLLLAA SMWLMRMAGD DQCSHYEALY FAKLVAKPTL IASMHHAFEH RKKVLRAVNV 960 MTERLRKANA TLGEYPKYIP DWADCGISFG HDATITRSDE AKKLDWLGSA PPDDDDGNAD 1020 GKKETSPGIR SDVDDSQVEV DNNLRDDGET TLPVVIVLAR GVRRLVDEDM STVDATVAIG 1080 ESFISERPQD DELVKSTRPG NLICVHPEQR GSDVAHGDEA RGSANPEVAR AAAEDEAHMP 1140 QRLLYNAYAT IWLGCKGSL

Sequence ? help Back to Top

Protein Sequence Length: 1159 aa Download sequence

MSLLNDGLCE DEANAPVDLR FQLSSSSGAA ATHTRIVKPY PDGGWAEQSS AAPCGRGDDG  60
LSQASGGVGN RNVASTQGGG RGDVCQRRDW TASRSGPGTP LGWQRQDDGS ASGAQVERHG  120
RQSWADARQA LRQAGADTIT RGVQELHVDG GGDAALRNHS TATTDGGASA KKGSTPSNWR  180
NKRRDDDTSG SDGEGGRNFW PVGDTVALVR AKRDQDLYFA GMGHNFGGMK TREWRWEDVR  240
QRLVKLGVQR KAVDCGKKWD NLMQQFKKVH KYQNLSGGKD YFKLASSARR SEGFSFVMDR  300
SVFDEMEAMT KGDHTIHLKN LADTGAPEGV QMPAGTGAVG DDIGSEGGGE PVDEDQGSTK  360
DSRFSGGSGA ATRKRKNMRQ QSFEVVTDVM KDHGTLMATT MDNASKRQCS MMLRQCQVLE  420
SELELQRGHY AVADAANTMM CNALLEIAKA IRDRSVVGGT SFGDRRVTSS ESDRSANVAS  480
SRLRHVIMST RGNARGTKRD TLPEDGEGQL KRGRHVPKGK RLRPEEASGS VPSRIAQGWV  540
AAAERDDDDE YASGEEHAEG TASAVRESGR QRSSDHIASK GMTTPPPAAL RVQGRDTRTE  600
KVTIVDMVNP SDDEPLEKRR LRTATASTPG TPTLPRQPRP DDEGGSAQHV AAGAVVVARG  660
AAGAEAAGAA GGATPGEKNP GREGDDPSSS PHRRGVMTKD LLERALLWVD DTAFWTTREG  720
RRMYNIVHET REYFVAIASG LPARAIPRSV VMPKSSAKVA RISDQSQLQQ ATKRATTLEN  780
VVMRILHVWV FKSGNRPRGY HLAFQYTLES FATDLARVMW CGEEWNNAVS AAVCVHTIDL  840
GMDLPLWFVG ANVDDRPDDD DMAAYQESTM ICIVHAFHGA IQMGATIDQG FILYECLCRV  900
ADCLRLLLAA SMWLMRMAGD DQCSHYEALY FAKLVAKPTL IASMHHAFEH RKKVLRAVNV  960
MTERLRKANA TLGEYPKYIP DWADCGISFG HDATITRSDE AKKLDWLGSA PPDDDDGNAD  1020
GKKETSPGIR SDVDDSQVEV DNNLRDDGET TLPVVIVLAR GVRRLVDEDM STVDATVAIG  1080
ESFISERPQD DELVKSTRPG NLICVHPEQR GSDVAHGDEA RGSANPEVAR AAAEDEAHMP  1140
QRLLYNAYAT IWLGCKGSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	2e-08	Trihelix family protein