PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG70310.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 346aa    MW: 37975.6 Da    PI: 6.4474
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG70310.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix42.51.7e-13150221266
    trihelix   2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkike 66 
                 W+ +++  Li+a+r        m++++ r k ++ +W++v+++++  g+ r++++C +kw+nl +++kk+ +
  GBG70310.1 150 WSVEHIIPLIRAKRvqdahmqGMGHAYARMKPREWKWQDVAQRLKNVGVDRNAEKCGKKWDNLMQQFKKVHH 221
                 9*************44444444444444779**************************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MQLPSPLSAA SEVARVCGVG VDGGTDFLDV GDGRDGREVW RDLRRDHRLR REEYITRGVE  60
RLHMGDRKNE NETDDPPAEP DDDDDDDDND VECGEGGGGH ASPSLQSNMA GKGGKSKPPG  120
RNARPRTKKG QGKGSGGEGD GDAEEKRNFW SVEHIIPLIR AKRVQDAHMQ GMGHAYARMK  180
PREWKWQDVA QRLKNVGVDR NAEKCGKKWD NLMQQFKKVH HFQSPSGGAD FFQLTSKERA  240
SRGFNFMMDR AVYYEIEGST WMNHTIHSKN VAGTGASGGV RPPSTSYVDP ESVADGEGGV  300
GREDEEEGST RGSSQTTGTP GGSGKRKSTR QQTFEALTEC MEKHGS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1123131ARPRTKKGQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.15e-09Trihelix family protein