PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG70414.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 322aa    MW: 34539.6 Da    PI: 5.849
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG70414.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix271.2e-0863137270
    trihelix   2 WtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 
                 Wt +e  +L ++  e++  + +++       k+ + ++++++m+e+g++r+ + C +kw +l k+ k+i++   +
  GBG70414.1  63 WTLEERVLLAKISGEDDALMADAEgahqhmTKGRRYDWIANRMKEEGYTRTGEDCWKKWAELTKKVKEIRDACDG 137
                 888888888888888888888765666667999********************************9999987665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MGREEEQQQP GIAEHIVDQL QRPRSVLPTA GEGRSAASQG AASGGEKRKA PKPTPPAKKN  60
TIWTLEERVL LAKISGEDDA LMADAEGAHQ HMTKGRRYDW IANRMKEEGY TRTGEDCWKK  120
WAELTKKVKE IRDACDGSRK PMYWEITTEE RKKLGISMTF EKPLWDAMEW FRTKAAFVMS  180
NTMASEDLRA GGCTTANDAE SEGTGTEASD SAAKTSSTSS GRSRGGDSAP LSSSLVAAME  240
ESTRSLCDGL DRAASTLARA SAEGAVMVVA RIGDVATEIG HVAGAIRQGN SVLEMLVEVM  300
AGRGPGGGTR SQEGGERTPP CT