PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG70579.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 1111aa MW: 121108 Da PI: 6.8809

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG70579.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	32.1	3.1e-10	308	382	2	69
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 W+ +e +L++ +re e +l r + k+ +We+++k+m+ g + + C +kw+n+ + ykki++ ++ GBG70579.1 308 WSPEEQIQLVRCKREQEMHLAglghnygRMRTKEWKWEDIAKRMANAGRPKDADDCMKKWDNIFQNYKKIQRFQN 382 9999999999999966665553333333778**************************************987655 PP

Sequence ? help Back to Top
Protein Sequence Length: 1111 aa Download sequence
MQVRVVPPAA EGGRRPPTMD PSRRYDPSMY NHLPSWEMPL PPSDEDPEGD ELPTFPLASG 60 STQLMSQTVL ASGSASNGRG EYTTLLQQGL GDGDDGGVDL RFGLSSGGGR EASRTFIIDA 120 DPSPRGVQQS GSRHTEQSTL RGGTSVCVGV RPSSAGRQHG SSAPSADRLT STCPERNGVA 180 VGSLRIGDTL HSMPKSTTPT QPDLRDDGTC RPAVRQTPCV ENITRGVSNM RAHNDGGDDD 240 GGGGDDADGR FGEDMEAGDD DDDIPIRSFG NTDGRGRGRS RGAVCGRSVG RGGKGGVSND 300 GGKSVTYWSP EEQIQLVRCK REQEMHLAGL GHNYGRMRTK EWKWEDIAKR MANAGRPKDA 360 DDCMKKWDNI FQNYKKIQRF QNASGRPDFF RLSNEERKEH NFKFRMERAL NNEIHIGMVG 420 NHTIFPPNIA DTGSPDGVHL PRRGAGAGES VGSEGAGEGL PEERSTTRDS DSNAASAAGG 480 GKRKNVRQQA LESIADVMDR HGELMSSTIE SSSKRQCSIF TRQCDILEQE VAVQKAYYAT 540 SDETQRMMCH ALLEIAAAIR GRPHFPLVRS HSQARLQRSP RNMSMRGNTR GKKCDVVVDD 600 SQEQGRGWRQ APKAKRVRTE DALPRVRGRG AQGWAGEVEG DCDDEFTAEE EQAEATTSEV 660 RESDPQRSSD RTASKRMQTP PHKAQQLRGR ETRTEKAPVV DLGDDDDEPL ERRRIRIHTT 720 VTPLPEVVVR VATNDRPVSG RLPATPSQPR QRNDAGNGGS VQRVGGGEVV AEARAVGAQV 780 AGAVGAVGSG NVGAVATGRE DAAVVATARE EARGERKVER EADEAGSSRP RRSVMTKNLI 840 DRAVLWVDDK AFWTTGEGRR LYNIVHETKD YFVAIASGLS APDVPRSVVL PKASTRVARI 900 VDQSQLQQAI SHAASVENVA LRILHGWVFK SGNWPRGYHV AFQYSLESFA TDIARAMWYG 960 EEWCEVVCPA ICTHTIDLSM DLPLWFAGAN IEDRPEDDGM AAHQESTVIG VAYAFRAAVQ 1020 MGALIDGEFI SHDHLSRVAD CFRLLLAACM WIMRMAGDDP RSHYEAFYFA DLVAKPTLVA 1080 AMHRSFDHRR SVVRAAKVVT DRLGKATATF G

Sequence ? help Back to Top

Protein Sequence Length: 1111 aa Download sequence

MQVRVVPPAA EGGRRPPTMD PSRRYDPSMY NHLPSWEMPL PPSDEDPEGD ELPTFPLASG  60
STQLMSQTVL ASGSASNGRG EYTTLLQQGL GDGDDGGVDL RFGLSSGGGR EASRTFIIDA  120
DPSPRGVQQS GSRHTEQSTL RGGTSVCVGV RPSSAGRQHG SSAPSADRLT STCPERNGVA  180
VGSLRIGDTL HSMPKSTTPT QPDLRDDGTC RPAVRQTPCV ENITRGVSNM RAHNDGGDDD  240
GGGGDDADGR FGEDMEAGDD DDDIPIRSFG NTDGRGRGRS RGAVCGRSVG RGGKGGVSND  300
GGKSVTYWSP EEQIQLVRCK REQEMHLAGL GHNYGRMRTK EWKWEDIAKR MANAGRPKDA  360
DDCMKKWDNI FQNYKKIQRF QNASGRPDFF RLSNEERKEH NFKFRMERAL NNEIHIGMVG  420
NHTIFPPNIA DTGSPDGVHL PRRGAGAGES VGSEGAGEGL PEERSTTRDS DSNAASAAGG  480
GKRKNVRQQA LESIADVMDR HGELMSSTIE SSSKRQCSIF TRQCDILEQE VAVQKAYYAT  540
SDETQRMMCH ALLEIAAAIR GRPHFPLVRS HSQARLQRSP RNMSMRGNTR GKKCDVVVDD  600
SQEQGRGWRQ APKAKRVRTE DALPRVRGRG AQGWAGEVEG DCDDEFTAEE EQAEATTSEV  660
RESDPQRSSD RTASKRMQTP PHKAQQLRGR ETRTEKAPVV DLGDDDDEPL ERRRIRIHTT  720
VTPLPEVVVR VATNDRPVSG RLPATPSQPR QRNDAGNGGS VQRVGGGEVV AEARAVGAQV  780
AGAVGAVGSG NVGAVATGRE DAAVVATARE EARGERKVER EADEAGSSRP RRSVMTKNLI  840
DRAVLWVDDK AFWTTGEGRR LYNIVHETKD YFVAIASGLS APDVPRSVVL PKASTRVARI  900
VDQSQLQQAI SHAASVENVA LRILHGWVFK SGNWPRGYHV AFQYSLESFA TDIARAMWYG  960
EEWCEVVCPA ICTHTIDLSM DLPLWFAGAN IEDRPEDDGM AAHQESTVIG VAYAFRAAVQ  1020
MGALIDGEFI SHDHLSRVAD CFRLLLAACM WIMRMAGDDP RSHYEAFYFA DLVAKPTLVA  1080
AMHRSFDHRR SVVRAAKVVT DRLGKATATF G