PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG70624.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

bHLH

Protein Properties

Length: 842aa MW: 86071.5 Da PI: 7.7383

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG70624.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	49.7	6.6e-16	658	704	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ +L+el+P++ K +Ka++L +A+eY+k+Lq GBG70624.1 658 VHNLSERRRRDRINEKMRTLQELIPNS-----NKTDKASMLDEAIEYLKMLQ 704 6***********************7.....5****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 842 aa Download sequence
MAFVPDELDN FVWPDAGSFG ELADVGKGMQ KGWQIKDQDC SSAGQPLADA VAPTLKRDGG 60 LESVINGTTV TTTAVPTTTA TTTGTVTEGP TGRNCVRIDD DLQNWLNNSG PGAEELEDAF 120 CPTYFGNMPP QSNVQILKDS TVSGTTARLL QQRTAHMMSL HSVNNPMSSR QVSAAAALAL 180 AASRAAGIIP PLQNGTDAFG KVRTTSTALV PPLRGDLTAP GHGTMSGSTS QLAASQENGG 240 AAGGVGGGTM ANARPHGGNF LNFLRPGLCD KTRSQIMGIQ SCGIGTNTRL RTSGQVDGLG 300 SGTKAQGGCS TVSGTAGTVS AMTPTSCVSE RASSGQRGMI HGVTLPGHCV VGGGNEGAGG 360 ALGAASGVPA PSTRVAANGG ASLSVKTGPR LLMGVGVDRL KGLRGSTCVG GGGGGDAVRN 420 PGGQVQVAAA TTSHPMTGLR NTSPRSQTRS PSAMEHSGLS CIQTSRPGPT ASPSVQTTST 480 SIQTSPSIQT SIGKGISVLP PPPVSAATTS TCVTNTAITD SIQSSGASLY PPLVKADCNM 540 STQPAVDSAE ATVTSSSGAS GNSCERATSA AQNEPCLTAL LRKRPREDDG LVTGTEEGED 600 DSCGDAKKPA TMGNGMATPT AAGMGTATTT TATTTTTTST VTKDKPTTAT KRSRAAEVHN 660 LSERRRRDRI NEKMRTLQEL IPNSNKTDKA SMLDEAIEYL KMLQVQLQMM SMRFGVVVPP 720 AMLPAGMQIH HPTLPSAAAA AAMSATAGGM PLGMLDMSLS IPVTAVPAAA GTLFDAHDHH 780 QHHQHHHQSS PHMIATAASM IDPLRVYLNP LHTTHQHIGA DMYNAFVLQQ QQAHNLGGVP 840 PH

Sequence ? help Back to Top

Protein Sequence Length: 842 aa Download sequence

MAFVPDELDN FVWPDAGSFG ELADVGKGMQ KGWQIKDQDC SSAGQPLADA VAPTLKRDGG  60
LESVINGTTV TTTAVPTTTA TTTGTVTEGP TGRNCVRIDD DLQNWLNNSG PGAEELEDAF  120
CPTYFGNMPP QSNVQILKDS TVSGTTARLL QQRTAHMMSL HSVNNPMSSR QVSAAAALAL  180
AASRAAGIIP PLQNGTDAFG KVRTTSTALV PPLRGDLTAP GHGTMSGSTS QLAASQENGG  240
AAGGVGGGTM ANARPHGGNF LNFLRPGLCD KTRSQIMGIQ SCGIGTNTRL RTSGQVDGLG  300
SGTKAQGGCS TVSGTAGTVS AMTPTSCVSE RASSGQRGMI HGVTLPGHCV VGGGNEGAGG  360
ALGAASGVPA PSTRVAANGG ASLSVKTGPR LLMGVGVDRL KGLRGSTCVG GGGGGDAVRN  420
PGGQVQVAAA TTSHPMTGLR NTSPRSQTRS PSAMEHSGLS CIQTSRPGPT ASPSVQTTST  480
SIQTSPSIQT SIGKGISVLP PPPVSAATTS TCVTNTAITD SIQSSGASLY PPLVKADCNM  540
STQPAVDSAE ATVTSSSGAS GNSCERATSA AQNEPCLTAL LRKRPREDDG LVTGTEEGED  600
DSCGDAKKPA TMGNGMATPT AAGMGTATTT TATTTTTTST VTKDKPTTAT KRSRAAEVHN  660
LSERRRRDRI NEKMRTLQEL IPNSNKTDKA SMLDEAIEYL KMLQVQLQMM SMRFGVVVPP  720
AMLPAGMQIH HPTLPSAAAA AAMSATAGGM PLGMLDMSLS IPVTAVPAAA GTLFDAHDHH  780
QHHQHHHQSS PHMIATAASM IDPLRVYLNP LHTTHQHIGA DMYNAFVLQQ QQAHNLGGVP  840
PH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	663	668	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	5e-32	bHLH family protein