PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG70639.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 427aa    MW: 46276.2 Da    PI: 6.2947
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG70639.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix25.63.2e-082432951870
    trihelix  18 eerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 
                 ++++ r k k+ +W +++k+m+ +g++r+   C ++wen+   ykk++ +ek+
  GBG70639.1 243 GHNFARMKTKQWKWTDIAKRMEVQGVTREWDVCMKRWENMFSWYKKVQWREKE 295
                 67899999**************************************9988876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 427 aa     Download sequence    
MRSSKRMACK GGMGARGDGA DMFMHRVMGG GVEGCFQSDT PRYDPALYAH LPQHLQPLPD  60
DENWQPPPST FDLAHGSTQS LSDSGVWVQD QRPRQGPMTS LLFDGSQQGM CPPLDLQLSS  120
GGHPAASRTL IINPASRSEG DASVGQSARR PGAASLQPTA APANINIHIG PTVTRPTTRV  180
RASSQGTQAN VVDDITAKVS TMRATSDGDG SAAGGADCEI MEDGAADDVE DEDDEDETLA  240
AAGHNFARMK TKQWKWTDIA KRMEVQGVTR EWDVCMKRWE NMFSWYKKVQ WREKESGLQS  300
FFTLTPKERA EKGYKFKMDR RLYQAIHAGQ HGNQTIHPPN VVDTGASETQ SGANNGGAGE  360
TSASENGDGE AGEGCASRSS SGMKFTKRKN ARQQAFEAVT DVMFSHSTVV ADSMDRASKR  420
QCDVLQR