PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG70763.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 876aa MW: 95185.8 Da PI: 4.592

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG70763.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	28.7	3.5e-09	608	684	2	71
trihelix 2 WtkqevlaLiearremeerlrrg.......klkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr 71 W+ +e l+L++ +r+ +e++ ++ k ++ +W ++sk+ + g++++ C ++wen+ + y+k+ ++ek+ GBG70763.1 608 WSLDESLVLVRCKRDQDEAMAAAgstfariKTREWKWTDISKRTTAYGVHKEWDACMKRWENVIGWYRKVWDREKES 684 ************9999999753444444699*************************************99973 PP

Sequence ? help Back to Top
Protein Sequence Length: 876 aa Download sequence
MSVAHPFVRY DWVKSAHEEI AAHFAVRITK AAIDKKPAPE AEGGEVPDDE VDLVIVQAWQ 60 TRMEGELLGI LFDKVEDGHL NTITDELLVF LAQLVDDLPL DILSRRDEKS GTDVLTRTLA 120 PHLLRSTCTE LDGDNCVYPS LSLYLEIDVT DLTHWDPFIQ RGNAIEASYE EEEEEEESEG 180 KESEENFKEE EEEEEEEEEE EEEEEEEEWE ENEEEEGGEE VKEEEKEEEE EASMEAHLDG 240 DDGGGGGSWR GSSDGGDGSS SRTMGQRDRS HGRPPPKGRP VVCPAASARC HPVLRIFCSL 300 RRLPESRSRK SKKKATRRMA GGEGSERFTY GIGSRLTEGA PHVTPPRFDP ALYAHLPPHQ 360 QPLPDDETWE PPTPAFPLAY GSTQSMSEGL ATPMHGCGGD GSMTSLLFSK DGDVAGPALD 420 LHLSSGGGRS VTRTLLVNQQ GQSEGEPSVG VFGGRSNHLR SPGVGGERAL RSPGVGGAPP 480 AQGVGYGDRT ALSAGRGRPS AGGGGHHATA DVAESPVSGC VERIIARVST MRASSDGDRT 540 DNGEMYGEGD GLDDDDMAGG REDDANVQPP PPAEGRIDGG AGRGKGRGKA KASGGDAGVA 600 SGGGRTYWSL DESLVLVRCK RDQDEAMAAA GSTFARIKTR EWKWTDISKR TTAYGVHKEW 660 DACMKRWENV IGWYRKVWDR EKESGMQSFF TMTPKERAEK GYKFQMDRRL YDSVHAMQHR 720 SQTAHPPNLV DTGASQQQQG GGAGGDGVLG GETSASDNCE GGVGDTNGVR PPGGPKILKR 780 KSARQNAFEA VTDVMQSHSK VVAESVDRAS KRQCEVLQRQ CDIMEREVEA QEKQCYVWES 840 GQRMLAPKDC PGSLQGLTIP QGGRVIGVVM RLSKQW

Sequence ? help Back to Top

Protein Sequence Length: 876 aa Download sequence

MSVAHPFVRY DWVKSAHEEI AAHFAVRITK AAIDKKPAPE AEGGEVPDDE VDLVIVQAWQ  60
TRMEGELLGI LFDKVEDGHL NTITDELLVF LAQLVDDLPL DILSRRDEKS GTDVLTRTLA  120
PHLLRSTCTE LDGDNCVYPS LSLYLEIDVT DLTHWDPFIQ RGNAIEASYE EEEEEEESEG  180
KESEENFKEE EEEEEEEEEE EEEEEEEEWE ENEEEEGGEE VKEEEKEEEE EASMEAHLDG  240
DDGGGGGSWR GSSDGGDGSS SRTMGQRDRS HGRPPPKGRP VVCPAASARC HPVLRIFCSL  300
RRLPESRSRK SKKKATRRMA GGEGSERFTY GIGSRLTEGA PHVTPPRFDP ALYAHLPPHQ  360
QPLPDDETWE PPTPAFPLAY GSTQSMSEGL ATPMHGCGGD GSMTSLLFSK DGDVAGPALD  420
LHLSSGGGRS VTRTLLVNQQ GQSEGEPSVG VFGGRSNHLR SPGVGGERAL RSPGVGGAPP  480
AQGVGYGDRT ALSAGRGRPS AGGGGHHATA DVAESPVSGC VERIIARVST MRASSDGDRT  540
DNGEMYGEGD GLDDDDMAGG REDDANVQPP PPAEGRIDGG AGRGKGRGKA KASGGDAGVA  600
SGGGRTYWSL DESLVLVRCK RDQDEAMAAA GSTFARIKTR EWKWTDISKR TTAYGVHKEW  660
DACMKRWENV IGWYRKVWDR EKESGMQSFF TMTPKERAEK GYKFQMDRRL YDSVHAMQHR  720
SQTAHPPNLV DTGASQQQQG GGAGGDGVLG GETSASDNCE GGVGDTNGVR PPGGPKILKR  780
KSARQNAFEA VTDVMQSHSK VVAESVDRAS KRQCEVLQRQ CDIMEREVEA QEKQCYVWES  840
GQRMLAPKDC PGSLQGLTIP QGGRVIGVVM RLSKQW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	2e-07	Trihelix family protein