PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG70767.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 654aa MW: 68186.1 Da PI: 5.5882

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG70767.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	32.2	2.8e-10	420	503	2	80
trihelix 2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcp 80 W + ++aLi+a+ e++++g+ k+ Wee+++++ ++gf + +C+ +w+ + y+++++ ++ s+++s ++ GBG70767.1 420 WAHLDTMALIRAKGnryvarvVNSEDMGNGRTSKKTWEEIASALTAGGFAHTWLECRTRWRTIWSTYRQVTALHRG--SGVQSYWR 503 9999*******99999988888999999**************************************999887..56666665 PP

Sequence ? help Back to Top
Protein Sequence Length: 654 aa Download sequence
MTDSSTESID LLRQHLMARA MEADELPVTQ SPITGHSTGG VGGGSPTAFF RSTGGRTGSF 60 LPRRAAANSR TDTTGGAGWR ESGVGYGQTE GATYVWHGGA ERRPSPVGAL VSRWSGRGKG 120 LTTSCRPVFM PSPSIRCGAL LHFSVDVCST PPFTTPLGFA TAVERPGCAG TALPRTENAT 180 FGKDGAFAAF NPCNTLSNNA HDTSLEDTAS CGGAAVRVTD IVTVDLGDEG GRPGGGGGDD 240 AGGQRVFGGG PNAGAGSAGK DTLAGSQGTA VDMQWTAFQS QAPSVDACAG MADNGSSGEP 300 ACNVDMYMHV DVQCADETLS GDTVRVHQVN MHVDVQCADE TLSGDMVRVH QANGDCDATG 360 ACAANAAGSR PEDGGEPVDV HCMPEGCYGS NEPQSSQGET TRLGDDGSQG AAPARPRGSW 420 AHLDTMALIR AKGNRYVARV VNSEDMGNGR TSKKTWEEIA SALTAGGFAH TWLECRTRWR 480 TIWSTYRQVT ALHRGSGVQS YWRMAAAKRV EKGFNFILLK ECFDLLEVFF WDDPSVHPRD 540 CEDPGTRFEE CRPPPAGGAP GGGAAAPGSG PREGAAVVAS DGAAAEGAHD SDPSPSYKKS 600 RTPQNARDKS FKELGCWMRE QTGALKHHTD ATLQCAQLTV SAIDRQSSIA AAVQ

Sequence ? help Back to Top

Protein Sequence Length: 654 aa Download sequence

MTDSSTESID LLRQHLMARA MEADELPVTQ SPITGHSTGG VGGGSPTAFF RSTGGRTGSF  60
LPRRAAANSR TDTTGGAGWR ESGVGYGQTE GATYVWHGGA ERRPSPVGAL VSRWSGRGKG  120
LTTSCRPVFM PSPSIRCGAL LHFSVDVCST PPFTTPLGFA TAVERPGCAG TALPRTENAT  180
FGKDGAFAAF NPCNTLSNNA HDTSLEDTAS CGGAAVRVTD IVTVDLGDEG GRPGGGGGDD  240
AGGQRVFGGG PNAGAGSAGK DTLAGSQGTA VDMQWTAFQS QAPSVDACAG MADNGSSGEP  300
ACNVDMYMHV DVQCADETLS GDTVRVHQVN MHVDVQCADE TLSGDMVRVH QANGDCDATG  360
ACAANAAGSR PEDGGEPVDV HCMPEGCYGS NEPQSSQGET TRLGDDGSQG AAPARPRGSW  420
AHLDTMALIR AKGNRYVARV VNSEDMGNGR TSKKTWEEIA SALTAGGFAH TWLECRTRWR  480
TIWSTYRQVT ALHRGSGVQS YWRMAAAKRV EKGFNFILLK ECFDLLEVFF WDDPSVHPRD  540
CEDPGTRFEE CRPPPAGGAP GGGAAAPGSG PREGAAVVAS DGAAAEGAHD SDPSPSYKKS  600
RTPQNARDKS FKELGCWMRE QTGALKHHTD ATLQCAQLTV SAIDRQSSIA AAVQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	230	238	GGRPGGGGG