PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG71207.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 2501aa MW: 281364 Da PI: 5.9348

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG71207.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	30.4	1e-09	312	385	2	68
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikege 68 W+ + l+L++ ++e + +l r k k +We+++k+m+ g + + +C +kw+nl + ykki++ + GBG71207.1 312 WSTEDQLLLVRCKQEQDMHLAglahnygRMKTKDWKWEDIAKRMANAGRPKDADECMKKWDNLFQNYKKIQRFQ 385 77788888888888555554433332227899*************************************98755 PP

Sequence ? help Back to Top
Protein Sequence Length: 2501 aa Download sequence
MPWWTSRYPE RFRSAEDNQI ASEEEGEEEG GGGGGGGGGE EEGGGEGGGE EEEAEEEAEE 60 AEEEGGGGGG GGEGRGEEDE RRRMAYEKLG MENRRDPGGS EEMENMEEEK EEDRRCVRRK 120 VSAICMPLVV MRRLPLLVLV VVMFLIVIFL HVCLSWRAWK QHRKRRASTE RAAGERSMAG 180 MQARAAGSPL FGGGRSSMAN RTTPTQADAR DEPACRTPVR PGPTVENITH GVSNMRAHSD 240 GGDDGTDGGD DADEGLRADV EAGDDNEDIQ IRPLGKMAGR AKGRSRGVRG RSVGRGGRGG 300 VSDDDGKSAT YWSTEDQLLL VRCKQEQDMH LAGLAHNYGR MKTKDWKWED IAKRMANAGR 360 PKDADECMKK WDNLFQNYKK IQRFQNASGG ADFFRLSNEE EGEQLQVPDG QGAVQRDPWR 420 HAGEPHNFPS QRRRHRQSGP GAAAEARSGW RGVCGQGYTL AFQYVLESVA TDLARAMWHG 480 EEWSNVVTPA VCAHTLELGM DLPLWYAGAH IEDRPKDEDM AAYQEATVMR LIAAFSTTVE 540 TGQSIDGGCI THERLWRVAE SFKILLAASM WIMRMSGDDQ RSHYEAFYFS NLVPKPFLLA 600 SMHRAFDHRH HILAAANAVT DRLGKAQVTL GRRCRTWAAR DDDDNDDDDD DDDDDDDNDD 660 DDDDDDGDDD DDDDDEDDND DDDDDDHHGE KCRDDDNDDY ADWAKLWPTW LFHVPLSREC 720 GSVHHCLIAA MSVVTWHITN VRTSEAMHDL AMSYQRQLFR RSTDEFTRSF QRKVRLLNIF 780 LTLVQTDAIL MPNQSFAMFL RKVQATSWNI LKLSPELLSI GMQSMDGPGY LHRREEIIPT 840 YGAASSVSSQ TEASGIDTNG STGLGYMDNM GPEKWQVLSC LLYNAADDVN SSPKYEQISA 900 NAARFKHQCM TLLTRSQTKA MDRKVGESLL AYEERLAAFI QKANDRAAAA AKERNRLEQE 960 EEAKRQKEEQ DRLRQEEADL QAAAEHRSRH RERLFTRETV IGDEAAHWVE VTSADGAPET 1020 EKGLSALAQV SHDLVATCAL QQEEILHLQQ TVDQMLARLQ ALEKQPAAVA AAGPSTLATR 1080 VQVLEDDVSN IKRVQAAAIV TPAAASSRRP PKLDDIPVFC DQSKTEPIPW WRQFTLRLDM 1140 YHVPNNDRHP CLYHRSGGAC QAWLDNILTS HGVAVSELHT KLTWQELTDA WHKRFQVEPP 1200 DLQAMDKLNK LHQNTLLSQD WITEFQGLAS TPDLPLAFRA IKHLFIMRSC PALQNALTQI 1260 AETLDTSDKL FSTASRIILT NIEPHNAGRS FVTTNGTQPK PKVACITSTE AATPNEGEVL 1320 AAARDDEVAV GDMLGYVAKV AHEFVSQWYE ENNAPLLYVR IQIGQRGCNA LLDCGATRNF 1380 ISQSFMTRAG LGAQVRRKSH PTTVALADGK TKQLLDRYIS AVPVYFAPHA CEPVTFDVLD 1440 TDFDVILGMP WLSSADYTVN FHRRTLTIRD ATGAEVPYKF SDVFETPSGI VPDRPISHEI 1500 ILEAGAVPPK GCIYRMSEEE LTVLRAQFDD LLDKGWIRPS SSPYGAPVLF VRKKNKDLRL 1560 YIDYRRLNAQ TIKNAGPLPR IDDLLERLSG AKYFSKLDLK SGYHQISIRP QDRYKTAFKT 1620 RYGHFEWVVM PFGLTNAPAT FQATMTTEFR AMLDRFVLVY LDDILVCSRT LEEHLEHLRR 1680 VLETLRSARY KANRDKCEFV RQELEYLGHF VSPEGIRPLA DKIQAIQEWP EPKNVTDVRS 1740 FLGLAGYYQR FIKGYSKIAA NLSKLQSEER PFDFDDDARH SFQTLKAALL SAEVLHIYDP 1800 LLATRVTTDA SGYGIGVVLE QHDGTDWHPV EYFSKKVPPV HSIDDARKKE LLAFVHALKR 1860 WRHFLLGRKA FRWVTDNNPL VFYKSQDTIN STIARWMAFI DQFDFFPDHI PGKSNRFVDA 1920 LSRRPDLCTA VYSTFEIDVD LRESFIRGYQ ADPHFRDKYA NCSSPNPVPS HYRIQEGYLF 1980 VHSRARPVIC LGVGFKRRTG EMAVAVLRET LATLSSFIDQ YDLEGGRMFV IDVGGRLVAT 2040 QGGNTYRVDP DTNTVIHFKG TESPDELVRE GARYVEKRYK RQYLLENCTS SIDVKIKGNK 2100 YYIHTRPFRF NNLRLTAIIM QPRAAILGAV DRNRYMTIIA PIVMAVGGLG FSCLLISLFA 2160 GIKLSHLQLR MRLAKELVAK QKVEAENEAK TTFLSNMSHE LRTPVACIIG MLELLQADAL 2220 TEDQRSGVEQ INSCAVRLLQ ILNSILDIAK EEKGKLVLEN EKFNLWKDLE SLVDMFAVKC 2280 ESKGLEISLE LADDVPEIVR GDQARVLQIF TNLVGNAVKF TSSGYVVVRG WVHNVKRSRV 2340 DVKVANKGRH KVTHADDHAL TTGTDYQPGC LCEQFSWSEM FRCSQRHLFS AVRRLFKYFV 2400 SRLKRKVQSV MMCIHKDGPG DADLGSDHST KEHRQDHKGT AEGTGPYTVV LVFEVEDTGP 2460 GIPLEMREKI FEDFVQGDAS TTRRATHLTT GKQQDTANAM G

Sequence ? help Back to Top

Protein Sequence Length: 2501 aa Download sequence

MPWWTSRYPE RFRSAEDNQI ASEEEGEEEG GGGGGGGGGE EEGGGEGGGE EEEAEEEAEE  60
AEEEGGGGGG GGEGRGEEDE RRRMAYEKLG MENRRDPGGS EEMENMEEEK EEDRRCVRRK  120
VSAICMPLVV MRRLPLLVLV VVMFLIVIFL HVCLSWRAWK QHRKRRASTE RAAGERSMAG  180
MQARAAGSPL FGGGRSSMAN RTTPTQADAR DEPACRTPVR PGPTVENITH GVSNMRAHSD  240
GGDDGTDGGD DADEGLRADV EAGDDNEDIQ IRPLGKMAGR AKGRSRGVRG RSVGRGGRGG  300
VSDDDGKSAT YWSTEDQLLL VRCKQEQDMH LAGLAHNYGR MKTKDWKWED IAKRMANAGR  360
PKDADECMKK WDNLFQNYKK IQRFQNASGG ADFFRLSNEE EGEQLQVPDG QGAVQRDPWR  420
HAGEPHNFPS QRRRHRQSGP GAAAEARSGW RGVCGQGYTL AFQYVLESVA TDLARAMWHG  480
EEWSNVVTPA VCAHTLELGM DLPLWYAGAH IEDRPKDEDM AAYQEATVMR LIAAFSTTVE  540
TGQSIDGGCI THERLWRVAE SFKILLAASM WIMRMSGDDQ RSHYEAFYFS NLVPKPFLLA  600
SMHRAFDHRH HILAAANAVT DRLGKAQVTL GRRCRTWAAR DDDDNDDDDD DDDDDDDNDD  660
DDDDDDGDDD DDDDDEDDND DDDDDDHHGE KCRDDDNDDY ADWAKLWPTW LFHVPLSREC  720
GSVHHCLIAA MSVVTWHITN VRTSEAMHDL AMSYQRQLFR RSTDEFTRSF QRKVRLLNIF  780
LTLVQTDAIL MPNQSFAMFL RKVQATSWNI LKLSPELLSI GMQSMDGPGY LHRREEIIPT  840
YGAASSVSSQ TEASGIDTNG STGLGYMDNM GPEKWQVLSC LLYNAADDVN SSPKYEQISA  900
NAARFKHQCM TLLTRSQTKA MDRKVGESLL AYEERLAAFI QKANDRAAAA AKERNRLEQE  960
EEAKRQKEEQ DRLRQEEADL QAAAEHRSRH RERLFTRETV IGDEAAHWVE VTSADGAPET  1020
EKGLSALAQV SHDLVATCAL QQEEILHLQQ TVDQMLARLQ ALEKQPAAVA AAGPSTLATR  1080
VQVLEDDVSN IKRVQAAAIV TPAAASSRRP PKLDDIPVFC DQSKTEPIPW WRQFTLRLDM  1140
YHVPNNDRHP CLYHRSGGAC QAWLDNILTS HGVAVSELHT KLTWQELTDA WHKRFQVEPP  1200
DLQAMDKLNK LHQNTLLSQD WITEFQGLAS TPDLPLAFRA IKHLFIMRSC PALQNALTQI  1260
AETLDTSDKL FSTASRIILT NIEPHNAGRS FVTTNGTQPK PKVACITSTE AATPNEGEVL  1320
AAARDDEVAV GDMLGYVAKV AHEFVSQWYE ENNAPLLYVR IQIGQRGCNA LLDCGATRNF  1380
ISQSFMTRAG LGAQVRRKSH PTTVALADGK TKQLLDRYIS AVPVYFAPHA CEPVTFDVLD  1440
TDFDVILGMP WLSSADYTVN FHRRTLTIRD ATGAEVPYKF SDVFETPSGI VPDRPISHEI  1500
ILEAGAVPPK GCIYRMSEEE LTVLRAQFDD LLDKGWIRPS SSPYGAPVLF VRKKNKDLRL  1560
YIDYRRLNAQ TIKNAGPLPR IDDLLERLSG AKYFSKLDLK SGYHQISIRP QDRYKTAFKT  1620
RYGHFEWVVM PFGLTNAPAT FQATMTTEFR AMLDRFVLVY LDDILVCSRT LEEHLEHLRR  1680
VLETLRSARY KANRDKCEFV RQELEYLGHF VSPEGIRPLA DKIQAIQEWP EPKNVTDVRS  1740
FLGLAGYYQR FIKGYSKIAA NLSKLQSEER PFDFDDDARH SFQTLKAALL SAEVLHIYDP  1800
LLATRVTTDA SGYGIGVVLE QHDGTDWHPV EYFSKKVPPV HSIDDARKKE LLAFVHALKR  1860
WRHFLLGRKA FRWVTDNNPL VFYKSQDTIN STIARWMAFI DQFDFFPDHI PGKSNRFVDA  1920
LSRRPDLCTA VYSTFEIDVD LRESFIRGYQ ADPHFRDKYA NCSSPNPVPS HYRIQEGYLF  1980
VHSRARPVIC LGVGFKRRTG EMAVAVLRET LATLSSFIDQ YDLEGGRMFV IDVGGRLVAT  2040
QGGNTYRVDP DTNTVIHFKG TESPDELVRE GARYVEKRYK RQYLLENCTS SIDVKIKGNK  2100
YYIHTRPFRF NNLRLTAIIM QPRAAILGAV DRNRYMTIIA PIVMAVGGLG FSCLLISLFA  2160
GIKLSHLQLR MRLAKELVAK QKVEAENEAK TTFLSNMSHE LRTPVACIIG MLELLQADAL  2220
TEDQRSGVEQ INSCAVRLLQ ILNSILDIAK EEKGKLVLEN EKFNLWKDLE SLVDMFAVKC  2280
ESKGLEISLE LADDVPEIVR GDQARVLQIF TNLVGNAVKF TSSGYVVVRG WVHNVKRSRV  2340
DVKVANKGRH KVTHADDHAL TTGTDYQPGC LCEQFSWSEM FRCSQRHLFS AVRRLFKYFV  2400
SRLKRKVQSV MMCIHKDGPG DADLGSDHST KEHRQDHKGT AEGTGPYTVV LVFEVEDTGP  2460
GIPLEMREKI FEDFVQGDAS TTRRATHLTT GKQQDTANAM G