PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG71224.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 388aa    MW: 41682 Da    PI: 5.9498
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG71224.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix26.12.3e-081441951869
    trihelix  18 eerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 
                  e+++++++  ++We +s  + + gf r+   C+++w+n+ k y+k+  +++
  GBG71224.1 144 SEAIGNACSLNKKWEGISTXVCAAGFIRNGYDCENRWKNMWKWYRKVLVHDG 195
                 56667788999***********************************866555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    
MPQWSTEQLQ EQPLLSPQSS ARGVGGVDML QLGVDVSQLE SQVVCDMPQR SLLSAFDEAV  60
QQTSHSLPTA GLGPSGTVVL SNQELGVGNV DGAGDCGNGL PHQMGGGDDD YADSQAGADS  120
QAGGDRGHHE TEGSMQARGT PVNSEAIGNA CSLNKKWEGI STXVCAAGFI RNGYDCENRW  180
KNMWKWYRKV LVHDGMSGVQ SYWTMSPEAR ANAGLTFRLR RSWFDLIDSF NIRNPTVHPE  240
GVVDPGNEED GRGPGQGSRG SPPVSGGRAE SGVANACAEG AEVGTSAKRR RTVANARERA  300
VKDISAVMRE QTDALREHSR RSVECAELTV KAMYKQAAVQ QQIGKLTAKV AREDMAIRKE  360
IGLLMAEKLE KGWNTFAQAL RDSRSSSS