PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG71374.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 601aa MW: 64262.5 Da PI: 6.2897

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG71374.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	29.4	2e-09	295	365	2	66
trihelix 2 WtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkike 66 W+ +e l+L ++ +e++ + +++ + ++We+v+ ++ + g++r+++ C++kw +l k+ + + GBG71374.1 295 WSLEERLDLAKFASEDDALMADAEgaqacmTRSKRWEWVAGRLGDIGYSRTAEDCRKKWAELVKKSVTCDD 365 99999999999999999999987666677799******************************998666655 PP

Sequence ? help Back to Top
Protein Sequence Length: 601 aa Download sequence
MERRSFTDDL YNDLGGSCLS ADTGGDAIFC AQPRMESVQS VPSWSYVPQP GVRRGSFNGY 60 GRERSAPQGG NSMAHAPLHS RGFREGSAMA CANIWGSPPD LPWQLSQPRA GMMPHISPVP 120 VGRTTGGGCS NHPTPHDQLS AELSAMGGGR VLQGASPTIG MLSIVGAAQA PRNSEVHQRR 180 MPIDVQARGV DSSSPDLFCA TDSRGYRQWH EEGRSDARTG FSGNTAGETG EAVVEGTTMG 240 NRGESAEKDD DDGTISAAPD KIDEGVGDRT KPPPAGGRKR KGGSSPRQPK KNNPWSLEER 300 LDLAKFASED DALMADAEGA QACMTRSKRW EWVAGRLGDI GYSRTAEDCR KKWAELVKKS 360 VTCDDTLASE DLRGGGSPSG GEAGSEGGGT DASDTATKTR RTSSRKARGG DSPALMYGMT 420 SVMEESTRAL CEGLDKAAST LARASTDGSR MVVTEIGAVV GAMRQGNAVL EMLVGVMAAR 480 GAGSGRGWQP RHGPLHKEID QKSYHYYSVD VNGKATVDLD AAIGYHKRQL SHVLVWVKKV 540 GSFIPDDWES LTVDIVGDIV LKLVDNLAED HDWRLDNGAF FYTYLDPLLV GRGYLHGEIR 600 M

Sequence ? help Back to Top

Protein Sequence Length: 601 aa Download sequence

MERRSFTDDL YNDLGGSCLS ADTGGDAIFC AQPRMESVQS VPSWSYVPQP GVRRGSFNGY  60
GRERSAPQGG NSMAHAPLHS RGFREGSAMA CANIWGSPPD LPWQLSQPRA GMMPHISPVP  120
VGRTTGGGCS NHPTPHDQLS AELSAMGGGR VLQGASPTIG MLSIVGAAQA PRNSEVHQRR  180
MPIDVQARGV DSSSPDLFCA TDSRGYRQWH EEGRSDARTG FSGNTAGETG EAVVEGTTMG  240
NRGESAEKDD DDGTISAAPD KIDEGVGDRT KPPPAGGRKR KGGSSPRQPK KNNPWSLEER  300
LDLAKFASED DALMADAEGA QACMTRSKRW EWVAGRLGDI GYSRTAEDCR KKWAELVKKS  360
VTCDDTLASE DLRGGGSPSG GEAGSEGGGT DASDTATKTR RTSSRKARGG DSPALMYGMT  420
SVMEESTRAL CEGLDKAAST LARASTDGSR MVVTEIGAVV GAMRQGNAVL EMLVGVMAAR  480
GAGSGRGWQP RHGPLHKEID QKSYHYYSVD VNGKATVDLD AAIGYHKRQL SHVLVWVKKV  540
GSFIPDDWES LTVDIVGDIV LKLVDNLAED HDWRLDNGAF FYTYLDPLLV GRGYLHGEIR  600
M

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G01380.1	2e-06	Trihelix family protein