PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG71457.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Nin-like
Protein Properties Length: 219aa    MW: 24155.1 Da    PI: 8.5933
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG71457.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK772.1e-24852650
      RWP-RK  6 sledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkik 50
                +le++s yF+lpi+ AAkeLgvc ++LKr+CR++GIkRWP+Rk++
  GBG71457.1  8 TLEEVSPYFHLPIETAAKELGVCSSALKRRCRRLGIKRWPFRKLR 52
                799****************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MVKIGGATLE EVSPYFHLPI ETAAKELGVC SSALKRRCRR LGIKRWPFRK LRAQVRSRMS  60
LSRTMDEVCR ERTLQGGCLT SYFKSEAATI GTTIPCSNPA MGGALGSQLD NRAPSSINVR  120
LPCATLANRR SGNEIIIKQE AGDQHEDLEP QPTDGQAGHD GNAGESTTHS SYGTTSPVLH  180
MDYRRNEKQT SSYESYREDT IRHIASALQA QDEFVHSSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.12e-12Nin-like family protein