PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG72150.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 584aa MW: 62780.9 Da PI: 6.9012

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG72150.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	42.5	1.7e-13	326	400	2	69
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 W+ + + aLi+a+r+ + +++ r k ++ +W +v+ ++++ g+ r++ +C +kw+nl +++kk+ + ++ GBG72150.1 326 WSVDDTIALIRAKRDQDAHFQgmghayaRMKPREWKWLDVATRLKKVGVDREADRCGKKWDNLMQQFKKVHHFQG 400 99**********8888888544443356899999*******************************988766 PP

Sequence ? help Back to Top
Protein Sequence Length: 584 aa Download sequence
MEGRKAISGS AGERGGRWSG HSPSNSPRPS ERSGNAHLPP HLQPLPDTDD EEGDDRQSWT 60 VQLGSGSTQE WATTELFGSR DGGKGQSYTE LLQQGLSDTD GDGGVNLSFG LGSGRSAAVS 120 RTVVVNPHPD NDGGDVTAVQ RSPRSPAPLR EALGSNKDPP RQQFRSPSVC RGASARPLWM 180 QSPSPLSAGS SAGRRVGECR ETAPAVADVS DARDGREVWA EQRRLMRSVR EESITRGLQR 240 LRVGEDGHDD EEAGADAHDP DWNDNGAEGW EDDAGNISPS KQAAAMGGRG GKTKSCGGNG 300 RRGKRPAGKG SDARGDVDGE GGRHFWSVDD TIALIRAKRD QDAHFQGMGH AYARMKPREW 360 KWLDVATRLK KVGVDREADR CGKKWDNLMQ QFKKVHHFQG LSGKHDFFQL SGKDRMSKGF 420 SFNMDRAVYD EILGSTAKNH TISPKNVADT SAQGGVRLPS ASSADPESVG DGDGGAEHDG 480 EDDGSTKGSS QTTGGAGGFG KRKSTRQQTF EAMTECMEKH GALMASTMES NNKRHCSIAI 540 RQCEALEALE AEIEVQKKHY TASDEVSKLM CHALLEIAKA IGKR

Sequence ? help Back to Top

Protein Sequence Length: 584 aa Download sequence

MEGRKAISGS AGERGGRWSG HSPSNSPRPS ERSGNAHLPP HLQPLPDTDD EEGDDRQSWT  60
VQLGSGSTQE WATTELFGSR DGGKGQSYTE LLQQGLSDTD GDGGVNLSFG LGSGRSAAVS  120
RTVVVNPHPD NDGGDVTAVQ RSPRSPAPLR EALGSNKDPP RQQFRSPSVC RGASARPLWM  180
QSPSPLSAGS SAGRRVGECR ETAPAVADVS DARDGREVWA EQRRLMRSVR EESITRGLQR  240
LRVGEDGHDD EEAGADAHDP DWNDNGAEGW EDDAGNISPS KQAAAMGGRG GKTKSCGGNG  300
RRGKRPAGKG SDARGDVDGE GGRHFWSVDD TIALIRAKRD QDAHFQGMGH AYARMKPREW  360
KWLDVATRLK KVGVDREADR CGKKWDNLMQ QFKKVHHFQG LSGKHDFFQL SGKDRMSKGF  420
SFNMDRAVYD EILGSTAKNH TISPKNVADT SAQGGVRLPS ASSADPESVG DGDGGAEHDG  480
EDDGSTKGSS QTTGGAGGFG KRKSTRQQTF EAMTECMEKH GALMASTMES NNKRHCSIAI  540
RQCEALEALE AEIEVQKKHY TASDEVSKLM CHALLEIAKA IGKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	1e-09	Trihelix family protein