PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG72158.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 1076aa MW: 117518 Da PI: 10.0527

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG72158.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	35.6	2.4e-11	353	429	2	70
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekk 70 Wt ++ aLi+a+r+ +++l r k k +We+v k++ + g+ r+++ C++kw+nl +++k + + +++ GBG72158.1 353 WTVEHMIALIRAKRDQDSHLAglghnhgRMKTKTWKWEDVEKRLVQMGVtGRKAVDCRKKWDNLYQQFKSVHKFMGE 429 ************99988885555444568999*******9999679***************99876665 PP

Sequence ? help Back to Top
Protein Sequence Length: 1076 aa Download sequence
MADLYRRLPL LLLVALLLLI VVVFHICFLG RVPGRKQTRR TAKRATKMDK FQTKTTLSVG 60 GGGSSRQRCK SAEGGRRSYD PTLYSHLPSH EIPLPPGDED VDNPKSSTVP LGSGSMQDWM 120 GNQVYRHAST PTYTDLLEGR TPAGYDTGLV DLSFGLRSGS GEGLTHTVLV NPASASKHTS 180 PSVRAAGPAD SRGFVSPRRV ALSTASVAAS KKKTVGLAGC RMTTPGGAID GEGDDDERNA 240 TEVVGRQFWD DERQRLRSTN TASITRGVAR ISVGAEEEFQ DCAGGGGEEI AADAGGDDND 300 EDDDNEMEIR PVGRKRGGST ARTKVRESRT GRKHKKNDEE LSAGDGTKSR DFWTVEHMIA 360 LIRAKRDQDS HLAGLGHNHG RMKTKTWKWE DVEKRLVQMG VTGRKAVDCR KKWDNLYQQF 420 KSVHKFMGES GKPNFFTLTP GERRERGFDF RMDERVYSEM KAMSRGDHTI HPTNLADTGR 480 AVVDGLSCPW CTARPRTVEK GIPGGIPYRW HSIATATKAP FVHGIVVAGV VIRLLRYDRR 540 VWAPRASTSS CIHVSQVACH RTGPSSTAAK RLIVNVVRRQ GARHRPPAAP SSSSSTWSFV 600 HVSQAPQLSA FGTHFFVDDM APRGASGKVK RNSGSGDGGE TQKSRGHIPK SKRPRFDDYN 660 SEHSGDLHGK DESMVDAQGA DVMKRLGFGR DGVSREQLAA VKQGLLGGVA VSLARTPRSA 720 GIVMTDARAA RQVPPKVVHV APRQPIPAQQ AGTSGVEKTL SAQKVDTTTG GGRTAVAENT 780 TVSGARRVRE RGGLMTFAAM MGGRMPGGGA MMTTTIDDPA QREPALRRAR NVEKVVLRAI 840 HDWIFKSSSR STGFARAESY VTLDFATDVA RAVWQALEWS RVVSPALVYH TLAMKMDVPL 900 WFAGVKIVDR PEDDDMAARQ EATILRLVDC WTDAVWCRQW VDGGRLKQDR LTRLADCLRV 960 LLSACIWIMR MGGDDDRSHY EASFYASMVA KPTLIAAGSY IFNWRRRHIV DSANLVLDRL 1020 GKAHLTQGDY PHCIPEWADC GLVFGHNAAL KNAAEAAKHG WIGSGPPADD DGDDEK

Sequence ? help Back to Top

Protein Sequence Length: 1076 aa Download sequence

MADLYRRLPL LLLVALLLLI VVVFHICFLG RVPGRKQTRR TAKRATKMDK FQTKTTLSVG  60
GGGSSRQRCK SAEGGRRSYD PTLYSHLPSH EIPLPPGDED VDNPKSSTVP LGSGSMQDWM  120
GNQVYRHAST PTYTDLLEGR TPAGYDTGLV DLSFGLRSGS GEGLTHTVLV NPASASKHTS  180
PSVRAAGPAD SRGFVSPRRV ALSTASVAAS KKKTVGLAGC RMTTPGGAID GEGDDDERNA  240
TEVVGRQFWD DERQRLRSTN TASITRGVAR ISVGAEEEFQ DCAGGGGEEI AADAGGDDND  300
EDDDNEMEIR PVGRKRGGST ARTKVRESRT GRKHKKNDEE LSAGDGTKSR DFWTVEHMIA  360
LIRAKRDQDS HLAGLGHNHG RMKTKTWKWE DVEKRLVQMG VTGRKAVDCR KKWDNLYQQF  420
KSVHKFMGES GKPNFFTLTP GERRERGFDF RMDERVYSEM KAMSRGDHTI HPTNLADTGR  480
AVVDGLSCPW CTARPRTVEK GIPGGIPYRW HSIATATKAP FVHGIVVAGV VIRLLRYDRR  540
VWAPRASTSS CIHVSQVACH RTGPSSTAAK RLIVNVVRRQ GARHRPPAAP SSSSSTWSFV  600
HVSQAPQLSA FGTHFFVDDM APRGASGKVK RNSGSGDGGE TQKSRGHIPK SKRPRFDDYN  660
SEHSGDLHGK DESMVDAQGA DVMKRLGFGR DGVSREQLAA VKQGLLGGVA VSLARTPRSA  720
GIVMTDARAA RQVPPKVVHV APRQPIPAQQ AGTSGVEKTL SAQKVDTTTG GGRTAVAENT  780
TVSGARRVRE RGGLMTFAAM MGGRMPGGGA MMTTTIDDPA QREPALRRAR NVEKVVLRAI  840
HDWIFKSSSR STGFARAESY VTLDFATDVA RAVWQALEWS RVVSPALVYH TLAMKMDVPL  900
WFAGVKIVDR PEDDDMAARQ EATILRLVDC WTDAVWCRQW VDGGRLKQDR LTRLADCLRV  960
LLSACIWIMR MGGDDDRSHY EASFYASMVA KPTLIAAGSY IFNWRRRHIV DSANLVLDRL  1020
GKAHLTQGDY PHCIPEWADC GLVFGHNAAL KNAAEAAKHG WIGSGPPADD DGDDEK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	802	809	GGRMPGGG