PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG72522.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 381aa    MW: 41480.1 Da    PI: 8.7272
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG72522.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix37.27.9e-12197281180
    trihelix   1 rWtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcp 80 
                 +W ++e+ aL+++r        +  e+ +++k++ + Wee+s+ ++++ f+  pk+Ck +w+ +++ + k+++++ +  s+++s ++
  GBG72522.1 197 KWGEEETIALLKIRCeqlavkgKNSEKKGAAKSNTKVWEEISADLAKESFKQDPKECKRRWNTVKRWFGKVNDNDDR--SGRQSYWK 281
                 7*************9666655555555556789****************************************9998..56666665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    
MCTPVQASPQ SPLLCTPVQA SAPTSAMATP LETLHIMSPL AGGSSLCDDV GXNGQACAVE  60
TRPALVRGPR DVRDALPSQE EVDGDARGDT PHAIGEAGNP ADKGXEAQDI XAGFDINHPA  120
DXGEDDNXGG KDAISSAGQG VKDXPVREGV XCSGGRGAMD KPGGKDDKCS GGEGAKDKAG  180
GKDVNTQKER RTAPNGKWGE EETIALLKIR CEQLAVKGKN SEKKGAAKSN TKVWEEISAD  240
LAKESFKQDP KECKRRWNTV KRWFGKVNDN DDRSGRQSYW KMTPSQRAQA NLDFNMTCSR  300
RTTREVRLRT PRIWWIRVQR RKCGPCLLPP LVRGWITEKC SSQCLLVLLK GVAAVVRVRR  360
EKGMHTDLRS EEGVRLQDLR P
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1250256PKECKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.11e-06Trihelix family protein