PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG72692.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 503aa MW: 53052.4 Da PI: 7.268

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG72692.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	32.6	2.1e-10	357	400	26	69
trihelix 26 lkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 ++ +We+v++++ e+g++rs++ C++kw ++ k+ ++i++ GBG72692.1 357 TRARRWEWVAARLGEEGYSRSAEDCRKKWAEMVKKVREIRDACD 400 6789******************************9999988655 PP

Sequence ? help Back to Top
Protein Sequence Length: 503 aa Download sequence
MAAVASHWCG GISIASPTCV IGMDGHGFTT ELYGGMAPSS QFDNAAPRGD DCMQAWIETA 60 PSPPSWCYMT QDGFTCTQPQ AGGPQSVSCS ANAGGGTQTP TNHGSQSYTG SARQMPTPIV 120 PSTVVKHPSA FVGTRGVTPA TEERMWGASR QSHLRTSDQR TAMMPPVPNM PLPRTFSGGD 180 PRQAMSFGSA DRPSVHQRPL PGHGVPHRSP PVVRGMQGAG RPPSPFRNTK GYGGGGTQCV 240 ETIGTDSSTM AGCSADTGGE SWEFDEERSA AGADRETVDL GDEEEPTAGG GDSTPSVRTV 300 SGHVRPPAPQ RKKGGKASAP PKKNNPWTLE ERVATSRLHG KDNALMADAE GAHQCMTRAR 360 RWEWVAARLG EEGYSRSAED CRKKWAEMVK KVREIRDACD GSGKPSYFDI STEERXKLGV 420 SLTFEKPLWD AMEWYRVKSS VTCDNTMASE DLRGTGSVGG SEGGSEGTGT DCSDGSAKRQ 480 RTGAGKGRGT DSGASVHGMA GAR

Sequence ? help Back to Top

Protein Sequence Length: 503 aa Download sequence

MAAVASHWCG GISIASPTCV IGMDGHGFTT ELYGGMAPSS QFDNAAPRGD DCMQAWIETA  60
PSPPSWCYMT QDGFTCTQPQ AGGPQSVSCS ANAGGGTQTP TNHGSQSYTG SARQMPTPIV  120
PSTVVKHPSA FVGTRGVTPA TEERMWGASR QSHLRTSDQR TAMMPPVPNM PLPRTFSGGD  180
PRQAMSFGSA DRPSVHQRPL PGHGVPHRSP PVVRGMQGAG RPPSPFRNTK GYGGGGTQCV  240
ETIGTDSSTM AGCSADTGGE SWEFDEERSA AGADRETVDL GDEEEPTAGG GDSTPSVRTV  300
SGHVRPPAPQ RKKGGKASAP PKKNNPWTLE ERVATSRLHG KDNALMADAE GAHQCMTRAR  360
RWEWVAARLG EEGYSRSAED CRKKWAEMVK KVREIRDACD GSGKPSYFDI STEERXKLGV  420
SLTFEKPLWD AMEWYRVKSS VTCDNTMASE DLRGTGSVGG SEGGSEGTGT DCSDGSAKRQ  480
RTGAGKGRGT DSGASVHGMA GAR