PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG72735.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 622aa MW: 64121.5 Da PI: 7.476

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG72735.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	25.2	4.2e-08	341	380	19	58
trihelix 19 erlrrgklkkplWeevskkmrergferspkqCkekwenln 58 + + + k ++++ e+++++++e+g++r+++ C++kw +l+ GBG72735.1 341 NGVHKHKTRGKRYEWIADRLKEEGYNRTAEDCRKKWTKLK 380 4455678999***************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 622 aa Download sequence
MEGRRFTSEL MGEYDBAMDS DRSGVEDIAG TQMDRGGGVQ RGSARQWPRT PFSNEGFQPG 60 AQQWQYTSAP PSSWGGQAGG GAGAGVRGSS SLYARQAVQM HDESIGVYPP AELPSSTCGG 120 AVSNDDPSAA WAPGSSQGMA HSPYGSVMSC GVAGPRPSSP GGRMENVVMT DHTERQSHVP 180 ANAYPQPQTM RAQVQGPVPA RLSEGGFMHG QSSGWGGGFS SLGTAGGGER TAFAVEGWHG 240 ETTAMQFGDE AVASSTPSRS GGPAGNVTGK RTADDAVGEG SVMRGDVGRS AEDTASGQKK 300 QRARRAPRAE GGKKNNPWTL EERIALGRTC VKDDALMADA NGVHKHKTRG KRYEWIADRL 360 KEEGYNRTAE DCRKKWTKLK EIVSQIGDKC YRSGEAGYFN MTTEQRREKD VCTTFEEPLW 420 DAMEWWRLKK SYTCDATFAS EDLAGGGGSG SGRSGGGSDG GEGGRGNLSG QGQGGTGPGL 480 AGGGSRSGEI GGGIGTGEGG VGGGSTRGGG VASDGGGTDA SDTSGRSRRT SSGRVRGDAP 540 VSSSSTKTAM QDSAKTLCEG LDKASGTLAR ATCTGAAMMS TRIGRAVAGA MHEGNALLQT 600 LIAVMAARSS NSTRGRGDND PS

Sequence ? help Back to Top

Protein Sequence Length: 622 aa Download sequence

MEGRRFTSEL MGEYDBAMDS DRSGVEDIAG TQMDRGGGVQ RGSARQWPRT PFSNEGFQPG  60
AQQWQYTSAP PSSWGGQAGG GAGAGVRGSS SLYARQAVQM HDESIGVYPP AELPSSTCGG  120
AVSNDDPSAA WAPGSSQGMA HSPYGSVMSC GVAGPRPSSP GGRMENVVMT DHTERQSHVP  180
ANAYPQPQTM RAQVQGPVPA RLSEGGFMHG QSSGWGGGFS SLGTAGGGER TAFAVEGWHG  240
ETTAMQFGDE AVASSTPSRS GGPAGNVTGK RTADDAVGEG SVMRGDVGRS AEDTASGQKK  300
QRARRAPRAE GGKKNNPWTL EERIALGRTC VKDDALMADA NGVHKHKTRG KRYEWIADRL  360
KEEGYNRTAE DCRKKWTKLK EIVSQIGDKC YRSGEAGYFN MTTEQRREKD VCTTFEEPLW  420
DAMEWWRLKK SYTCDATFAS EDLAGGGGSG SGRSGGGSDG GEGGRGNLSG QGQGGTGPGL  480
AGGGSRSGEI GGGIGTGEGG VGGGSTRGGG VASDGGGTDA SDTSGRSRRT SSGRVRGDAP  540
VSSSSTKTAM QDSAKTLCEG LDKASGTLAR ATCTGAAMMS TRIGRAVAGA MHEGNALLQT  600
LIAVMAARSS NSTRGRGDND PS