PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG73022.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 524aa    MW: 56333.7 Da    PI: 6.9682
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG73022.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix29.91.4e-09224306280
    trihelix   2 WtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcp 80 
                 Wt +e laL + +re++  + +++      +k+ + e+vs++m+e+g+ rs++ C++kw nl ++ k   +  ++  s+++s + 
  GBG73022.1 224 WTLEECLALAKWQREDDAMMADASarhkcmKKGERQEWVSERMKEEGIMRSAEDCRKKWFNLGQKLKLFVDKVGR--SGHQSYWD 306
                 ***************9999998755667779999****************************9999988887776..45555554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 524 aa     Download sequence    
MPVHGGSTIG AGSFTAALCG EYEDPFSVGL PRRMSMDDLS GPQRCYGVTS NQQWNGGVYS  60
HGQNDLSRRG AQSGSGQGTL PQGGTPGHGQ SQATTGANVD SGSGVREGQA CSHAAPQQVT  120
VEAGSSESVD RLRAGLPPAS RGEGRGRGEG RQGTSDSSGQ RGRARQPAQG GRGRGGCTPP  180
SSACPAEASG SGKGVGGQET NDNPTTVDEG MRKGKPPAKK IVPWTLEECL ALAKWQREDD  240
AMMADASARH KCMKKGERQE WVSERMKEEG IMRSAEDCRK KWFNLGQKLK LFVDKVGRSG  300
HQSYWDMIEE EREAEGLYAT FDRRLWQAME WMLQRPSGTC DKAMNSDTMG GAEAEGTGEG  360
SGDQAGSDRG GSDTSGSRSK FRRTSGNKVH VTMLEELKLE RRCHPRGRMD FSPDTADLHS  420
RVYYVLVEGT VAMKIDGGFG YDKEGNLVDV ILNVKKLSEV VPDDWRLPEH DVVGDIVRYL  480
VSAIADEHMA ALHANAFYVA HMQPPLRAGS TCTALCSRGV LMTI