PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG73463.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 545aa MW: 59867.3 Da PI: 4.8054

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG73463.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	30.1	1.2e-09	290	360	2	65
trihelix 2 WtkqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkik 65 W+ + aLi+a+r+ + +l+++ ++ +W+ v +++ + g+ r ++C +kw+nl +++kk+ GBG73463.1 290 WSVGHMVALIRAKRDQDAQLQASGhalarmwGREWKWAGVHERLLKVGVDRPTEKCGKKWDNLMQQFKKVH 360 9999999************9755677777999*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 545 aa Download sequence
MFSMGDKQRG ATNWLIFIQG ARSRLQVMVE ALRSQLGVRF EAVGGAASSS PPYREVMANM 60 LQIVYELQDL QTDGRMDGQL EALKRCCDDI FEEGQDVYAA LEEDWYLHLV DTEDEDYPNA 120 CITGGDELEE GQTGVDNALV ADKIATNNNV VMQIRGKDIG IVSLGLSDNN IVNNNNNNNN 180 NNNNNNTNSN YDAGIMGAGN TAIRFCVGER ALEADGPVRG GDEYDDGDEG ECEAHDDDIG 240 DAFPLRTASM GSRGGKSRAS ASTGRRGKKV VAWGGEDEGD GEPEGGRNFW SVGHMVALIR 300 AKRDQDAQLQ ASGHALARMW GREWKWAGVH ERLLKVGVDR PTEKCGKKWD NLMQQFKKVH 360 LFQGESWKED FFRLSAKERL AREFISNMEW AVYDEIKGSI AKSHTIHSQN IADPGEARGV 420 QLPSGSSGGP ESVSDGDAGG DGNDEDDSST RGCSQTTGSP GGFGKRKSMR QQTFEALTEC 480 MEKHKTLMAS TLKSASKRQC SIQIRQCEAL EAEVEVQKKH YAASDEVSKM MCHALREIVK 540 AIRDR

Sequence ? help Back to Top

Protein Sequence Length: 545 aa Download sequence

MFSMGDKQRG ATNWLIFIQG ARSRLQVMVE ALRSQLGVRF EAVGGAASSS PPYREVMANM  60
LQIVYELQDL QTDGRMDGQL EALKRCCDDI FEEGQDVYAA LEEDWYLHLV DTEDEDYPNA  120
CITGGDELEE GQTGVDNALV ADKIATNNNV VMQIRGKDIG IVSLGLSDNN IVNNNNNNNN  180
NNNNNNTNSN YDAGIMGAGN TAIRFCVGER ALEADGPVRG GDEYDDGDEG ECEAHDDDIG  240
DAFPLRTASM GSRGGKSRAS ASTGRRGKKV VAWGGEDEGD GEPEGGRNFW SVGHMVALIR  300
AKRDQDAQLQ ASGHALARMW GREWKWAGVH ERLLKVGVDR PTEKCGKKWD NLMQQFKKVH  360
LFQGESWKED FFRLSAKERL AREFISNMEW AVYDEIKGSI AKSHTIHSQN IADPGEARGV  420
QLPSGSSGGP ESVSDGDAGG DGNDEDDSST RGCSQTTGSP GGFGKRKSMR QQTFEALTEC  480
MEKHKTLMAS TLKSASKRQC SIQIRQCEAL EAEVEVQKKH YAASDEVSKM MCHALREIVK  540
AIRDR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	6e-08	Trihelix family protein