PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG73473.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 234aa    MW: 26077.4 Da    PI: 8.9658
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG73473.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix34.36.2e-115542170
    trihelix 21 lrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70
                + r k ++ +W +v+ ++++ g+ r++ +C++kw+nl +++kk+ + ++ 
  GBG73473.1  5 YIRMKPREWKWLDVATRLKKVGVDREADRCRKKWDNLMQQFKKVHHFQGL 54
                556778889**********************************9987765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MGHAYIRMKP REWKWLDVAT RLKKVGVDRE ADRCRKKWDN LMQQFKKVHH FQGLSGKQDF  60
FHLCGKDRMS KGFSFNMDRA VYDEILGSTA KNHTINPKNV ADTGAQGGVR LPSASSTDPE  120
SMGDGDGGAE HDDDNDGSTK GSSQTTGGAG GFGKRKSTRQ QFFEAMTECM EKHGALMAST  180
MESNNKRHCS IAIRQCEALE AEVEVQKKHY AASDEVSKLM YHTLLEIAKA IAKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33240.14e-06Trihelix family protein