PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG73551.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 729aa MW: 78539.1 Da PI: 7.0417

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG73551.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	26.5	1.7e-08	387	458	2	67
trihelix 2 WtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkikeg 67 Wt +e aL ++ e+++ + +++ + + e++++ ++++g++r+ + C++kw + +k+ ++i++ GBG73551.1 387 WTLEEPIALARISGEDDTLMADAEgaqqhmTRTRRYEWIADGLADQGYSRTGEDCRKKWAEFQKKVREIRDA 458 *************9999998765666668899****************************99999886 PP

Sequence ? help Back to Top
Protein Sequence Length: 729 aa Download sequence
MQSVLTHRIG EADLLLGEHI YSWRKCYLYS HHGIYAGDGR VIHFVNPEEE MAAFCSSSSS 60 SLLKINQEAC PDCRAAFRSA TEGGNTVMET CLPCFLKGGE LYRYQYGANK LFFLSRLRRG 120 TCTMAESDGG VKVLHRGRYL LEHGFGKYDL RNHSCEDFAL YCKTRKLLKK GAGEAIFVNG 180 SSLAVLMVVM GAHAGSFLTS SAACAVGLTA GLLKFRYDHD IAVNEDVVDV EELVRSLGGG 240 PPSATTEPQS GIPGGVSARQ SPTRQQRQQR AAMGEDRGLG VATVIWEYGS PTGRREGRQA 300 GSANAMRDTT GNCSPNMAGV SSDGAGEGLA AGLDGENSDC DGDDGPTADS STNPGGGAHG 360 RTTARPACGT RKKGEKSTTQ PKKNNLWTLE EPIALARISG EDDTLMADAE GAQQHMTRTR 420 RYEWIADGLA DQGYSRTGED CRKKWAEFQK KVREIRDACS GSGKPGYFDI TTEERKTLGI 480 PLAFEKPLWD AMEWYRKKAS LNCDNTMASE DLRGTGSRGS ASEASSEGGG TEPTGSAAKT 540 RRTATGKVRG GESSSYMFGI TSVMEESTRS LCEGLDKAGG NMARATTEGA ALMATKMGDM 600 ATEIGVVAGA MRQGNSVFEM MVGVMASRGA GTQTCRRSRA LRAAVDIDAA LGFNNRLLSH 660 FVFYVTKTGS IVPDDWTHLQ VDIVGDIVEN LIQNLVIEHA SRLDNRAFYY TFFEKPLVGR 720 GYLHGEVRA

Sequence ? help Back to Top

Protein Sequence Length: 729 aa Download sequence

MQSVLTHRIG EADLLLGEHI YSWRKCYLYS HHGIYAGDGR VIHFVNPEEE MAAFCSSSSS  60
SLLKINQEAC PDCRAAFRSA TEGGNTVMET CLPCFLKGGE LYRYQYGANK LFFLSRLRRG  120
TCTMAESDGG VKVLHRGRYL LEHGFGKYDL RNHSCEDFAL YCKTRKLLKK GAGEAIFVNG  180
SSLAVLMVVM GAHAGSFLTS SAACAVGLTA GLLKFRYDHD IAVNEDVVDV EELVRSLGGG  240
PPSATTEPQS GIPGGVSARQ SPTRQQRQQR AAMGEDRGLG VATVIWEYGS PTGRREGRQA  300
GSANAMRDTT GNCSPNMAGV SSDGAGEGLA AGLDGENSDC DGDDGPTADS STNPGGGAHG  360
RTTARPACGT RKKGEKSTTQ PKKNNLWTLE EPIALARISG EDDTLMADAE GAQQHMTRTR  420
RYEWIADGLA DQGYSRTGED CRKKWAEFQK KVREIRDACS GSGKPGYFDI TTEERKTLGI  480
PLAFEKPLWD AMEWYRKKAS LNCDNTMASE DLRGTGSRGS ASEASSEGGG TEPTGSAAKT  540
RRTATGKVRG GESSSYMFGI TSVMEESTRS LCEGLDKAGG NMARATTEGA ALMATKMGDM  600
ATEIGVVAGA MRQGNSVFEM MVGVMASRGA GTQTCRRSRA LRAAVDIDAA LGFNNRLLSH  660
FVFYVTKTGS IVPDDWTHLQ VDIVGDIVEN LIQNLVIEHA SRLDNRAFYY TFFEKPLVGR  720
GYLHGEVRA