PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG74155.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 542aa MW: 58692.9 Da PI: 9.2243

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG74155.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	29.2	2.4e-09	321	402	2	79
trihelix 2 WtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstc 79 Wt +e laL + +re++ + +++ +k+ + e+vs++m e+g+ rs++ C++kw nl ++ k + + ++ s+++s + GBG74155.1 321 WTLEECLALAKWQREDDAMMADASvrhrwmKKGERQEWVSERMTEEGIMRSAEDCRKKWFNLGQKLKLLVDKVGR--SGHQSYW 402 ****************99998777778799******************************99999888876..4566556 PP

Sequence ? help Back to Top
Protein Sequence Length: 542 aa Download sequence
MGRSRQSSQQ SAQYQGLHSV PPSTRLSMLS QDADKFGVPP TFPAAVGQLP AWGNDPPDLR 60 DVRPGHVPFY HGRDDHGGVT GRGSSSAAMY AQLTAAHMPV HGGNTIVAGS FTAALCREYE 120 DPFSGGLRRR MSMDDLSGPQ QCYGVTSNQQ WNGGVYIHGQ NDLSRRGAQS GSGQGTLPQG 180 GTQGHGQSQA TMGANVDSGS GVREGQACSH AGPQQVTVEA GSSESVDRLR AGLPPASRGE 240 GRGRGEGRQG TSDSSGQSGR ARQPTRGGRG RGGCTPPSSA CPTEASGSGK DIGGQETNEN 300 PTTVDEGMRK GKPPAKKIVP WTLEECLALA KWQREDDAMM ADASVRHRWM KKGERQEWVS 360 ERMTEEGIMR SAEDCRKKWF NLGQKLKLLV DKVGRSGHQS YWDMTEEERE AEGLYATFDR 420 RLCQAMEWML QRPSGTCDEA MNSNTMGGAE AEGMGGGSGD QAGSDRGGSD TSGSRSKFRR 480 TSGSRVHVGD DPSFVSSLWE LPWLSPYMYT WRVWIEPRRR LLTRTRRVRP SSPGALAKWR 540 RK

Sequence ? help Back to Top

Protein Sequence Length: 542 aa Download sequence

MGRSRQSSQQ SAQYQGLHSV PPSTRLSMLS QDADKFGVPP TFPAAVGQLP AWGNDPPDLR  60
DVRPGHVPFY HGRDDHGGVT GRGSSSAAMY AQLTAAHMPV HGGNTIVAGS FTAALCREYE  120
DPFSGGLRRR MSMDDLSGPQ QCYGVTSNQQ WNGGVYIHGQ NDLSRRGAQS GSGQGTLPQG  180
GTQGHGQSQA TMGANVDSGS GVREGQACSH AGPQQVTVEA GSSESVDRLR AGLPPASRGE  240
GRGRGEGRQG TSDSSGQSGR ARQPTRGGRG RGGCTPPSSA CPTEASGSGK DIGGQETNEN  300
PTTVDEGMRK GKPPAKKIVP WTLEECLALA KWQREDDAMM ADASVRHRWM KKGERQEWVS  360
ERMTEEGIMR SAEDCRKKWF NLGQKLKLLV DKVGRSGHQS YWDMTEEERE AEGLYATFDR  420
RLCQAMEWML QRPSGTCDEA MNSNTMGGAE AEGMGGGSGD QAGSDRGGSD TSGSRSKFRR  480
TSGSRVHVGD DPSFVSSLWE LPWLSPYMYT WRVWIEPRRR LLTRTRRVRP SSPGALAKWR  540
RK