PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG74164.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 419aa    MW: 45929 Da    PI: 7.5286
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG74164.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix35.23.2e-11147218266
    trihelix   2 WtkqevlaLiearremeerlrrg.......klkkplWeevskkmrergferspkqCkekwenlnkrykkike 66 
                 W+ ++  +Li+a+r+ + +l+++       ++++ +W +v +++ + g+ r + +C +kw+nl +++kki +
  GBG74164.1 147 WSVDHMVTLIRAKRDQDAQLQAAghtfarmRSREWKWLDVRERLLKVGVDRPADKCGKKWDNLMQQFKKIHT 218
                 999***********999999975333333369*************************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 419 aa     Download sequence    
MNPPPAFSRG HDTVPRPVER GVSAEDFPFE GARGDGRRVW KESRQELRRQ QEESITQGVQ  60
RLRVGERAGQ ADAVGGGGDI WTDGDEVECD AEEDDSGDVF PLRAPNMGGR GGRGRASMNV  120
GRRRKRPSAT SPDAEGEGDG EGGRNFWSVD HMVTLIRAKR DQDAQLQAAG HTFARMRSRE  180
WKWLDVRERL LKVGVDRPAD KCGKKWDNLM QQFKKIHTFM GMLGKEDFFQ LTSQQRAEKG  240
FSFNMDRAIY EEIKGAKERS HTISPSNVAD TGGAGGVQLP SAQSATPESV GDGDADGDRT  300
HPRKTSHSST PQEVAQTTTQ GRHQWTLAMK KFAEMAFGAE CAKANTQDGG GAHCCCRSQG  360
ASCLLIRGDV CADAQTAIGR FRMTPTTTPL CFPDGTVTRT HLPAPPHQTP RLADSNFEF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.16e-09Trihelix family protein