PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG74397.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 909aa MW: 97804.3 Da PI: 8.9636

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG74397.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	34.3	6.1e-11	252	324	2	67
trihelix 2 WtkqevlaLiearremeerlrrg.......klkkplWeevskkmrergferspkqCkekwenlnkrykkikeg 67 W ++ aLi+a+r+ + +l+++ ++++ +W +v +++ + g+ r + +C +kw+nl +++kki + GBG74397.1 252 WFVDHMVALIRAKRDQDAQLQASghafarmQSREWKWLDVQERLLKVGVDRPADKCGKKWDNLMQQFKKIHTF 324 8889999*****9999999763334433699**********************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 909 aa Download sequence
MQPLPDSDEG EADVDVSNTV LLGSGSFTSL LHEGAQEEER LPPVDLTFGL RSGSPSSATR 60 TVLVNPHPDD DAGQVTLVGR GMRGGSARQE TSEKTRERPR VQATSGPSIP RTTAGRPEWM 120 NPPPAFSRGR DTVPRPVERG VSVEDFPFEG ARGDGRRVWK ESRQELRRQQ EESITQDAVG 180 GGGDVWTDGD EVECDVEEDD SGDVFPLRAP SMSGRGGRGR ASTNAGRRRK RPSAASADAE 240 GEGDGEGGRN FWFVDHMVAL IRAKRDQDAQ LQASGHAFAR MQSREWKWLD VQERLLKVGV 300 DRPADKCGKK WDNLMQQFKK IHTFMGMSGK EDFFQLTSQQ RAEKGFSFNM DRAVYEEIKG 360 AKERSDTISP SNLADTGGAG GVQLPSAQSA TPEFVGDGDA AGDGNDEDDS SARGASQTTG 420 SPADFGKRKN VRQQTFEALS ECMEKHGALM ASTMESASMR QCEAMESASK RQCSIQIRQY 480 EAIEAEVETV AKRHLRVRTP RHALPLSPPS RSPDVIFMPR HRSFSRSVCL AAISLARRHL 540 HVGTPVRALF VSPPSISPHV IFTLGLLFAH CSSRRHLSRQ TSSPRWDSCS RTMCVAAIYL 600 ARRHRWDSCS PSVCLAAIAL ARRHLHAGTP VRALCVSPPS LSPDAVFARR RIHAWSPPAQ 660 AFPHRHHSRP SFFSSSLSVF SAMTNTRNSS KGKRERDSQK AEAAGVVKRG RHQAKKPKAS 720 SGGALVIGRS AREEWVDEAS SGQDDDFKLE ADLFHGRKVT LRDVSNARMV SGEEGVDGGK 780 DGGHGVARGK GEAVGDVGGG VAAREERDQP MTPAMHGAVP SKDVQAAQNV GKHPPMRAPS 840 NPATPTAGQA RRDEGAGVNA AVRGQLATCI PAKEAAAVGA VVGTSTAGAG GAVATVVMML 900 MTTIPSLTG

Sequence ? help Back to Top

Protein Sequence Length: 909 aa Download sequence

MQPLPDSDEG EADVDVSNTV LLGSGSFTSL LHEGAQEEER LPPVDLTFGL RSGSPSSATR  60
TVLVNPHPDD DAGQVTLVGR GMRGGSARQE TSEKTRERPR VQATSGPSIP RTTAGRPEWM  120
NPPPAFSRGR DTVPRPVERG VSVEDFPFEG ARGDGRRVWK ESRQELRRQQ EESITQDAVG  180
GGGDVWTDGD EVECDVEEDD SGDVFPLRAP SMSGRGGRGR ASTNAGRRRK RPSAASADAE  240
GEGDGEGGRN FWFVDHMVAL IRAKRDQDAQ LQASGHAFAR MQSREWKWLD VQERLLKVGV  300
DRPADKCGKK WDNLMQQFKK IHTFMGMSGK EDFFQLTSQQ RAEKGFSFNM DRAVYEEIKG  360
AKERSDTISP SNLADTGGAG GVQLPSAQSA TPEFVGDGDA AGDGNDEDDS SARGASQTTG  420
SPADFGKRKN VRQQTFEALS ECMEKHGALM ASTMESASMR QCEAMESASK RQCSIQIRQY  480
EAIEAEVETV AKRHLRVRTP RHALPLSPPS RSPDVIFMPR HRSFSRSVCL AAISLARRHL  540
HVGTPVRALF VSPPSISPHV IFTLGLLFAH CSSRRHLSRQ TSSPRWDSCS RTMCVAAIYL  600
ARRHRWDSCS PSVCLAAIAL ARRHLHAGTP VRALCVSPPS LSPDAVFARR RIHAWSPPAQ  660
AFPHRHHSRP SFFSSSLSVF SAMTNTRNSS KGKRERDSQK AEAAGVVKRG RHQAKKPKAS  720
SGGALVIGRS AREEWVDEAS SGQDDDFKLE ADLFHGRKVT LRDVSNARMV SGEEGVDGGK  780
DGGHGVARGK GEAVGDVGGG VAAREERDQP MTPAMHGAVP SKDVQAAQNV GKHPPMRAPS  840
NPATPTAGQA RRDEGAGVNA AVRGQLATCI PAKEAAAVGA VVGTSTAGAG GAVATVVMML  900
MTTIPSLTG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	3e-08	Trihelix family protein