PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG74777.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 610aa MW: 66391.5 Da PI: 7.1796

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG74777.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	43.2	1e-13	324	399	1	69
trihelix 1 rWtkqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 rW + e+ L ++r+e+++ ++++ lk + W++v ++m+ +gf+r+++qCk+k++ l +y+++k++++ GBG74777.1 324 RWGETETEWLCRFRNEVKTLMGEETeplgrarLKTGFWKDVEQRMKGKGFNRNAEQCKNKFNTLLDYYRRLKAHKS 399 8************99999997533344444**************************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 610 aa Download sequence
MILAAGSSFC TVALLNAEEE EQPSMAHYSQ HAGLSSIEDW GYSETQNEGP PAARYGSSSL 60 AAGEQQQCYT HDGCKSQCPI GDKVGANVGG PEGDLQQAHR RSVFLFGGPA WSGGGVRGPE 120 NAHVTAPVID VPLPSVVTGH GQLPSPVSPV AGFRMGLGGD DEVALRQRLR LRAMAMSDGL 180 SLSPDERGRA PVALRTPPRT DGSCHGSPGP STVSSVDNDT TGCRSSHTPA ALSPNRQASF 240 RLSPESIRGD ASPQPHVPHT GSPEYVINRI IRENEAGGLS NQDCDPRRLQ NTPCSVENVA 300 GTSTTRPSEA PPTRPPPAEK NTDRWGETET EWLCRFRNEV KTLMGEETEP LGRARLKTGF 360 WKDVEQRMKG KGFNRNAEQC KNKFNTLLDY YRRLKAHKSW SGLPSYWDMN QTRRKKYNVD 420 FVLRRAVYDI IHPVEKDKDS INLSNLMDSG ADEERLEDSE RCNNVDAETE GGSEDPAVGS 480 GSSPGLGGSS GGQRSTGFGP VLGKRRRSYV NARESSMHAV TGAMRDHTAA LTRSDRECVK 540 MRCEATRDIA RHQAEVNREL MQQEIASRER IATITGERVE KGYLILADAI RSLRRRSNSP 600 SSGPDSSDSR

Sequence ? help Back to Top

Protein Sequence Length: 610 aa Download sequence

MILAAGSSFC TVALLNAEEE EQPSMAHYSQ HAGLSSIEDW GYSETQNEGP PAARYGSSSL  60
AAGEQQQCYT HDGCKSQCPI GDKVGANVGG PEGDLQQAHR RSVFLFGGPA WSGGGVRGPE  120
NAHVTAPVID VPLPSVVTGH GQLPSPVSPV AGFRMGLGGD DEVALRQRLR LRAMAMSDGL  180
SLSPDERGRA PVALRTPPRT DGSCHGSPGP STVSSVDNDT TGCRSSHTPA ALSPNRQASF  240
RLSPESIRGD ASPQPHVPHT GSPEYVINRI IRENEAGGLS NQDCDPRRLQ NTPCSVENVA  300
GTSTTRPSEA PPTRPPPAEK NTDRWGETET EWLCRFRNEV KTLMGEETEP LGRARLKTGF  360
WKDVEQRMKG KGFNRNAEQC KNKFNTLLDY YRRLKAHKSW SGLPSYWDMN QTRRKKYNVD  420
FVLRRAVYDI IHPVEKDKDS INLSNLMDSG ADEERLEDSE RCNNVDAETE GGSEDPAVGS  480
GSSPGLGGSS GGQRSTGFGP VLGKRRRSYV NARESSMHAV TGAMRDHTAA LTRSDRECVK  540
MRCEATRDIA RHQAEVNREL MQQEIASRER IATITGERVE KGYLILADAI RSLRRRSNSP  600
SSGPDSSDSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	5e-07	Trihelix family protein