PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG75220.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 612aa MW: 66974.9 Da PI: 8.0166

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG75220.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	30.5	9.8e-10	356	432	2	70
trihelix 2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekk 70 Wt ++ aLi+a++ m+++++r k k +W++v +++ + g+ +r+ + C +kw+nl +++k + + +++ GBG75220.1 356 WTVEHMIALIRAKSdqdlhlaGMGHNYGRMKTKTWKWDDVENRLVQMGVtSRKVVDCGKKWDNLYQQFKSVHKFMGE 432 ************8888888899999999**********99999799***************99887665 PP

Sequence ? help Back to Top
Protein Sequence Length: 612 aa Download sequence
MADLYHRLPL LLLVALLLLI VVVFHICFLG RVPGRKQTRR TPKKSRKMDK LQTKTTMSVE 60 GGGSSHQRCN SAEDGRRPYD PTLYSHLPSH EIPLPPSDDD VDEGRSSTVP LGRGSTQDWM 120 GSQLYRHAST PTYRDLLEGR TPAGYDAGLV DLSFGLRSGS GEDLTHTIVV NPTSATKHTS 180 PSVRAVGPTD SRGFVSPRQV ALSTTSVAAS RTKTAGLAGC RTTTPGGRID GEGDDDEHAA 240 TKVVGRQFWD DERRRLRSAN TSIITRGVAR ISVGAEDVFV VCDGGGGEEI TADDGGDDND 300 EDNDGEMEIR PVGRKRGGSR ATTKVRESRT GRKGKKCVEE LSAASASDGT KSRDFWTVEH 360 MIALIRAKSD QDLHLAGMGH NYGRMKTKTW KWDDVENRLV QMGVTSRKVV DCGKKWDNLY 420 QQFKSVHKFM GESGKPNFFT LTPGERRERW FNFRMDERVY SEMKAMSRSD HTIHPMNLGN 480 TGAPGGVQMP GPLGGGNESG GSDGGGDGQD DDHGSTRDSS LSGGGGGGAS KRKNVRHQTF 540 EAMADVMKEH GALMTTTVDT ASKRQCLILT RQCDILEREI QVQKEHYEKA DQANFMMCNA 600 LMEIAEAIRE RA

Sequence ? help Back to Top

Protein Sequence Length: 612 aa Download sequence

MADLYHRLPL LLLVALLLLI VVVFHICFLG RVPGRKQTRR TPKKSRKMDK LQTKTTMSVE  60
GGGSSHQRCN SAEDGRRPYD PTLYSHLPSH EIPLPPSDDD VDEGRSSTVP LGRGSTQDWM  120
GSQLYRHAST PTYRDLLEGR TPAGYDAGLV DLSFGLRSGS GEDLTHTIVV NPTSATKHTS  180
PSVRAVGPTD SRGFVSPRQV ALSTTSVAAS RTKTAGLAGC RTTTPGGRID GEGDDDEHAA  240
TKVVGRQFWD DERRRLRSAN TSIITRGVAR ISVGAEDVFV VCDGGGGEEI TADDGGDDND  300
EDNDGEMEIR PVGRKRGGSR ATTKVRESRT GRKGKKCVEE LSAASASDGT KSRDFWTVEH  360
MIALIRAKSD QDLHLAGMGH NYGRMKTKTW KWDDVENRLV QMGVTSRKVV DCGKKWDNLY  420
QQFKSVHKFM GESGKPNFFT LTPGERRERW FNFRMDERVY SEMKAMSRSD HTIHPMNLGN  480
TGAPGGVQMP GPLGGGNESG GSDGGGDGQD DDHGSTRDSS LSGGGGGGAS KRKNVRHQTF  540
EAMADVMKEH GALMTTTVDT ASKRQCLILT RQCDILEREI QVQKEHYEKA DQANFMMCNA  600
LMEIAEAIRE RA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	39	45	RRTPKKS