PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG75303.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 648aa MW: 70405.2 Da PI: 5.0934

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG75303.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	31.8	3.7e-10	238	314	2	70
trihelix 2 WtkqevlaLiearremeerlrrg.......klkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekk 70 W + l+L+ +r++++++ ++ k k ++W e++++m+++g+ + + C ++wen+ + y+ki ++ek+ GBG75303.1 238 WDSDDSLLLVCCKRDLDDHMASQgsnfarmKTKTQKWNEIARRMAQQGLtDKDGESCMKRWENIFGWYRKIWDREKD 314 8888888899999977777775322233337***************9788*****************999986 PP

Sequence ? help Back to Top
Protein Sequence Length: 648 aa Download sequence
PLPYDEVWVQ PPSTLPLAWG STQTSYETAP RSDHRGTGMG PMSSLLADPK GGRSDPIRLH 60 LSPSCTMDAS RTVLVDHSTR SQGGVSVTME DAREDGAVTQ RPLMSSSACR VSHAVSPSPF 120 DPGRSPLTHN GPAGTLTRAS VAESPQVIER IIARYSRMRT DVQADDGGAE GAEAEEVVEG 180 ECTDDEDESE EDDDVLLKEV TPKTTKKKTT KSRGKSKARD GGGDGDGAVG GGRNSKNWDS 240 DDSLLLVCCK RDLDDHMASQ GSNFARMKTK TQKWNEIARR MAQQGLTDKD GESCMKRWEN 300 IFGWYRKIWD REKDSGLYDA IHATTPNNQA IHPPNLCDTS GLPPLQADES EQSQARGATI 360 GGETSAGDNM ERESADGYGS RSSGGTAAGK RKNARQLAFD SVTDVMKTHS TVVADFVDRA 420 SKRQCDVLQR QCDIMEREAR TQEKQCDMLD VVRAARGGWD GFVKCGVRDS VEERALTSLG 480 GLEDRGGGGG GGLFGGGFAD CEMEVEVALR GRVLSRCIIF YETRHHRGKD YGKDFGFEDG 540 VTRQGVRHYE VDADGDTCLH IIVGYRYGRE LLKQVVVFAR KVGTAIPDRW VGGSDVLADI 600 IDLLVSNVAM GCAGRLDELA TYIVHAEPPF ADRSYLHGEV QIVLADIC

Sequence ? help Back to Top

Protein Sequence Length: 648 aa Download sequence

PLPYDEVWVQ PPSTLPLAWG STQTSYETAP RSDHRGTGMG PMSSLLADPK GGRSDPIRLH  60
LSPSCTMDAS RTVLVDHSTR SQGGVSVTME DAREDGAVTQ RPLMSSSACR VSHAVSPSPF  120
DPGRSPLTHN GPAGTLTRAS VAESPQVIER IIARYSRMRT DVQADDGGAE GAEAEEVVEG  180
ECTDDEDESE EDDDVLLKEV TPKTTKKKTT KSRGKSKARD GGGDGDGAVG GGRNSKNWDS  240
DDSLLLVCCK RDLDDHMASQ GSNFARMKTK TQKWNEIARR MAQQGLTDKD GESCMKRWEN  300
IFGWYRKIWD REKDSGLYDA IHATTPNNQA IHPPNLCDTS GLPPLQADES EQSQARGATI  360
GGETSAGDNM ERESADGYGS RSSGGTAAGK RKNARQLAFD SVTDVMKTHS TVVADFVDRA  420
SKRQCDVLQR QCDIMEREAR TQEKQCDMLD VVRAARGGWD GFVKCGVRDS VEERALTSLG  480
GLEDRGGGGG GGLFGGGFAD CEMEVEVALR GRVLSRCIIF YETRHHRGKD YGKDFGFEDG  540
VTRQGVRHYE VDADGDTCLH IIVGYRYGRE LLKQVVVFAR KVGTAIPDRW VGGSDVLADI  600
IDLLVSNVAM GCAGRLDELA TYIVHAEPPF ADRSYLHGEV QIVLADIC