PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG75461.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 1814aa MW: 192510 Da PI: 6.6752

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG75461.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	30.5	9.4e-10	677	734	22	79
trihelix 22 rrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstc 79 ++g ++ + W +++++mr++g+er+ qC+ +w+nl++ y+ + +++ ++ ++s + GBG75461.1 677 EEGPRANGAWHRIARAMRAEGLERTWDQCQTRWKNLRRWYRLVVNHDHSQIGCHRSYW 734 34568899*********************************99998887643333355 PP

Sequence ? help Back to Top
Protein Sequence Length: 1814 aa Download sequence
MTRGDWDPLE RLRGLLRTRA MCLDALLQPR QPLSGPHLWT DTPYVAVRMT HGGAGMAGAL 60 QPINNGSITD LGERPRGGDA GVLCSRGSDL GGTGHVSVLC TRGTDLGACR PGACTRESSD 120 FSACTRGTDL RACTRGTDVP ACTRGTDVRA CTRSTDVRAC TRGTDVRACT RGTDVRACTG 180 GTDVRACTRD SNAAGRIEAA AVCTRASEAD LRAGGSGSPP VVDAACTRGD PRGHGGDPRG 240 ALKVGESGAR GRGDDVVVGT RGRGSDLDVG ARGSGGGVDL CTRGGGADDV RTSGSGVGGQ 300 RTLGSGSLAV GAPRPVAEEQ TISEAASRLF GQPCENQQST PTGLFRNEKE KDNANASVVV 360 VPHVPRVCGR EQSNVRPVFV RKRGAGSGGG GKDRGRKDAG GVDGRRKNGG GKDGGIKNGG 420 GKDGGIKNGG GKDGGIKNGG GKNGGGKDGG IQNGEAAHRD DVAPRGGKDG GRNNGEGKEG 480 GGSDGGPARR DDVGPIYGLD DQEKDKNARC AMGPRGGRVA REKEETDKRM TVRKEACRDT 540 CCDDDVAILT KPATRVDVGI SVVMTRRSVR GGDLVDPSVT RTGSRQADGV EATDCPSLIG 600 SGGESREEKG DEVAGDVADG KRVRARRIYR DRWGDYDTTV LIGLLGEERS ASRGLMGGRG 660 GGGGGGGGQE QGQSTEEEGP RANGAWHRIA RAMRAEGLER TWDQCQTRWK NLRRWYRLVV 720 NHDHSQIGCH RSYWSMNPSE RCEANLNFDL RRNWFAAIGA YLGGGDLDMP RRRRPGGGSA 780 PAPAPAPAAA SQGGIGHVSG PGNSANAPRS PDLHSVRQQQ QQQQQQQQHH TNVEASTFQK 840 LPRVVTQSTG EWTHQSGGEG WRSGDGGGEG RRSGDGGGGL QALNNNGEGS SSWRKTSDDE 900 SHRRMDACHV SCSRRRRAPD DGSGDYNSSS SSVARSHNSD IRGCVEGTPS PPSISSPSRL 960 VVVEAAGNEG RSGDCRSAGE RAELVENVSG GGHYEHCEEY VEARSGDGRV SGSPLHRHPQ 1020 KDDVVAATRE GVDFADLACH NAEGAHDCHV SCSRIHRQHQ DKVGVGDGEG RGGGCAHPDE 1080 GGRSGDDDYV AGSRMHREHH ESEGGGGYGE GVSGGCTYQG DDGRSGDCCR VSYSRVHSRQ 1140 HRDDIVDVGN AAGAGCACQK GEPLSNEEDG ELQKSDKEGN GEPSSKEKGV LQSDKQGSEG 1200 WREKKRDENS SRREKKSEET VRWDPGYLSG CRGVKRTRSV EDYSEEGVLQ SDKQGSGGGR 1260 EKREKKSDEN SSRREKSRED TLRSERGHVS GCGGVRRTRS VEDYSEEGVL QSDKEGSGGG 1320 REKRQKKSDE NSSRREKTSE DTLRSERGHV SGCGGVRRTR SVEDHNSFGA QVDGDTVHLP 1380 PSPPSPLPYP SPKRRRGTAA SDVMAAMKEE EDSSSRDLVK GETIREGEGG LKECHVSDLE 1440 QLPLKEEWAE LGAAMSKDMT ELRAAMTEFR AVRIWTRRTA AVGISTLELE GRGGRSPCIC 1500 KDMAAELPAA TSTKAMEKDS SGVVMRQQQT SEEAGGLKEC HVSDLEQLPR KEEESGELPA 1560 AAVRTKAMED DSSGAVIGEP TREGVGLKEC HVSDVEQLPL KEESSGKLPA AAGRTKAMEE 1620 DSSGAVIGEP TREGVGLKEC HVSDVEQFPL DKQWSEFRAA LSKDMAELRA AMIAFRSGIS 1680 EFCAARRWQP SFGLQGDGGR APCSCTDMAP ELRRAATSTM AMEEGSSGVV TREEPTSDVM 1740 GLKECHVSGV EQLPLKREWA ELRDALREDM SELRAATAEL RATCQILERC DTWHEAPAGV 1800 SVLGEEAIMY QSRV

Sequence ? help Back to Top

Protein Sequence Length: 1814 aa Download sequence

MTRGDWDPLE RLRGLLRTRA MCLDALLQPR QPLSGPHLWT DTPYVAVRMT HGGAGMAGAL  60
QPINNGSITD LGERPRGGDA GVLCSRGSDL GGTGHVSVLC TRGTDLGACR PGACTRESSD  120
FSACTRGTDL RACTRGTDVP ACTRGTDVRA CTRSTDVRAC TRGTDVRACT RGTDVRACTG  180
GTDVRACTRD SNAAGRIEAA AVCTRASEAD LRAGGSGSPP VVDAACTRGD PRGHGGDPRG  240
ALKVGESGAR GRGDDVVVGT RGRGSDLDVG ARGSGGGVDL CTRGGGADDV RTSGSGVGGQ  300
RTLGSGSLAV GAPRPVAEEQ TISEAASRLF GQPCENQQST PTGLFRNEKE KDNANASVVV  360
VPHVPRVCGR EQSNVRPVFV RKRGAGSGGG GKDRGRKDAG GVDGRRKNGG GKDGGIKNGG  420
GKDGGIKNGG GKDGGIKNGG GKNGGGKDGG IQNGEAAHRD DVAPRGGKDG GRNNGEGKEG  480
GGSDGGPARR DDVGPIYGLD DQEKDKNARC AMGPRGGRVA REKEETDKRM TVRKEACRDT  540
CCDDDVAILT KPATRVDVGI SVVMTRRSVR GGDLVDPSVT RTGSRQADGV EATDCPSLIG  600
SGGESREEKG DEVAGDVADG KRVRARRIYR DRWGDYDTTV LIGLLGEERS ASRGLMGGRG  660
GGGGGGGGQE QGQSTEEEGP RANGAWHRIA RAMRAEGLER TWDQCQTRWK NLRRWYRLVV  720
NHDHSQIGCH RSYWSMNPSE RCEANLNFDL RRNWFAAIGA YLGGGDLDMP RRRRPGGGSA  780
PAPAPAPAAA SQGGIGHVSG PGNSANAPRS PDLHSVRQQQ QQQQQQQQHH TNVEASTFQK  840
LPRVVTQSTG EWTHQSGGEG WRSGDGGGEG RRSGDGGGGL QALNNNGEGS SSWRKTSDDE  900
SHRRMDACHV SCSRRRRAPD DGSGDYNSSS SSVARSHNSD IRGCVEGTPS PPSISSPSRL  960
VVVEAAGNEG RSGDCRSAGE RAELVENVSG GGHYEHCEEY VEARSGDGRV SGSPLHRHPQ  1020
KDDVVAATRE GVDFADLACH NAEGAHDCHV SCSRIHRQHQ DKVGVGDGEG RGGGCAHPDE  1080
GGRSGDDDYV AGSRMHREHH ESEGGGGYGE GVSGGCTYQG DDGRSGDCCR VSYSRVHSRQ  1140
HRDDIVDVGN AAGAGCACQK GEPLSNEEDG ELQKSDKEGN GEPSSKEKGV LQSDKQGSEG  1200
WREKKRDENS SRREKKSEET VRWDPGYLSG CRGVKRTRSV EDYSEEGVLQ SDKQGSGGGR  1260
EKREKKSDEN SSRREKSRED TLRSERGHVS GCGGVRRTRS VEDYSEEGVL QSDKEGSGGG  1320
REKRQKKSDE NSSRREKTSE DTLRSERGHV SGCGGVRRTR SVEDHNSFGA QVDGDTVHLP  1380
PSPPSPLPYP SPKRRRGTAA SDVMAAMKEE EDSSSRDLVK GETIREGEGG LKECHVSDLE  1440
QLPLKEEWAE LGAAMSKDMT ELRAAMTEFR AVRIWTRRTA AVGISTLELE GRGGRSPCIC  1500
KDMAAELPAA TSTKAMEKDS SGVVMRQQQT SEEAGGLKEC HVSDLEQLPR KEEESGELPA  1560
AAVRTKAMED DSSGAVIGEP TREGVGLKEC HVSDVEQLPL KEESSGKLPA AAGRTKAMEE  1620
DSSGAVIGEP TREGVGLKEC HVSDVEQFPL DKQWSEFRAA LSKDMAELRA AMIAFRSGIS  1680
EFCAARRWQP SFGLQGDGGR APCSCTDMAP ELRRAATSTM AMEEGSSGVV TREEPTSDVM  1740
GLKECHVSGV EQLPLKREWA ELRDALREDM SELRAATAEL RATCQILERC DTWHEAPAGV  1800
SVLGEEAIMY QSRV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	439	446	GGGKNGGG
2	440	447	GGGKNGGG
3	657	664	GGGKNGGG