PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG75647.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 419aa    MW: 46196 Da    PI: 6.9057
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG75647.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix39.51.4e-12135210169
    trihelix   1 rWtkqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 
                 rW + e+  L ++r+e++e ++++        lk++ W+ v ++mr++g++r  +qCk+k++++   y+++++ e+
  GBG75647.1 135 RWGETETEWLCRFRNEVKELMGQETeaygrarLKAGFWKIVEERMRAKGYTRDHEQCKNKFNQILDNYRRLRADEG 210
                 8**************99988885422333334***************************************99886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 419 aa     Download sequence    
MQQQCPPAAS SENVLNRIIR DIEAGVRTPE SDYVNVGGEA VSLHTSPSHT PSPLHTPGGV  60
PTATPSPVVR ESGTHDTAPR SESSPSPPAA IPSPINGNVS SHTPPSVSVP SRTRVGGPSR  120
NPRRRLSSGE KSTDRWGETE TEWLCRFRNE VKELMGQETE AYGRARLKAG FWKIVEERMR  180
AKGYTRDHEQ CKNKFNQILD NYRRLRADEG WSGLPSYWDM NQTRRKKYNV DFVLRRSWYD  240
IIHLVEKDKD SINLTNLMDS GANDERVENG EGVNDRDGAM EGGSEDNGSG YGGSPGGSQS  300
TGFESTLGKR KRGAANARES SVQAVTVAMR AHTTALTRSD MECAKMHCQA TRDIAKQQVD  360
ANRELLQQDI ASRERIATIM GDKVESGYYV LADAIRSLHP PTHSPSTDPE SGDDQWCSM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.11e-05Trihelix family protein