PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG75649.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 412aa    MW: 45783.1 Da    PI: 6.9244
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG75649.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix37.65.9e-12137212270
    trihelix   2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 
                 W    + aL++a+r        m+ ++ r k ++ +We+v ++++  g++r+ + C++kw+nl +++kk+ + ++ 
  GBG75649.1 137 WLVGDTIALVRAKRdqnlyivGMGPSFARMKTREWKWEDVRARLQTMGITREGVDCRKKWDNLMQQFKKVHKFQNL 212
                 666778999999999999999999*********************************************9987765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 412 aa     Download sequence    
MHLSPASRRG SGIPRGRQRT EDSCEGGADV QHDGRQLWAE CRQALNQGGT KTITRGVQRL  60
YVDEGDEAAF EEALSCDDVD GDDDCNSYDL SDIKPLGRKV ANGGTSAKRG PAPKNRRNKK  120
MDDDTGRSDG EGSRNFWLVG DTIALVRAKR DQNLYIVGMG PSFARMKTRE WKWEDVRARL  180
QTMGITREGV DCRKKWDNLM QQFKKVHKFQ NLSDGKDYFK LASKARRSEG FNFVMDRSVY  240
DEMEAMTKGD HTIYLKNLAD TGAAEGVQMP AGDGVGGETM ASEGGGEAAD EEQGSTKDST  300
LNTGSDGGYG KRKNMWQQTF EVVADVMDKH GALMASTMDS ASKWQCSMML RQCEILESEV  360
EVQRKHYAAA DEANRLMCNA MMKIAKAIHE RSCGGGYGKR KNMWPQTFEH NG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.18e-07Trihelix family protein