PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG75743.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 497aa MW: 54076.2 Da PI: 8.4045

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG75743.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	36.3	1.4e-11	217	292	1	69
trihelix 1 rWtkqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 rW + + L + r+e++ ++++ lk++ W+ v ++mr +g++r +qCk+k++++ +y+++k++e+ GBG75743.1 217 RWGEAGTEWLCRCRNEVKALMGEETeayrcarLKAGFWKYVEERMRTKGYNRADNQCKNKFNQILDYYRRLKAHER 292 78888888999999988887776433334444****************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 497 aa Download sequence
MRAMAMADGL TPLMDEWPVG GYETSPTHNA GSQHGSPGPS SVSSLNTDTM PSQQSGAPTA 60 MSPVGHGSPR VSTEPLCDGG LRQQLSPHAT SSEYVLNRII RDIEAGADPT KHVNGGRDGG 120 QVVASQTTPL HTPPPCGSSG GAAAGTPHPV TRDSRSHHTP PRCRSSGGVA AGTPYPLIGD 180 GCSHTPPTAL QGLGTSTGGP SAGHRPRPCP GEKNTDRWGE AGTEWLCRCR NEVKALMGEE 240 TEAYRCARLK AGFWKYVEER MRTKGYNRAD NQCKNKFNQI LDYYRRLKAH ERWYGLPSYW 300 DMNQTRRKKY NVNFVLRRSW YDIIHPMEKD KDSINLANLM DSGADEERLE DGEGANNGDG 360 KMDGEGEDPA AGSGGSAGGS RPTGFEPMLG KRKRTANNAR ESGVQAVTVA MRAHTTALTR 420 SDLKIAKMRC EATRDIAKQQ TEVHRELLQQ DIVSRERIAN IMGDKVEKGY FVLVDVIRSL 480 RPRTDSPSRD PDSNESR

Sequence ? help Back to Top

Protein Sequence Length: 497 aa Download sequence

MRAMAMADGL TPLMDEWPVG GYETSPTHNA GSQHGSPGPS SVSSLNTDTM PSQQSGAPTA  60
MSPVGHGSPR VSTEPLCDGG LRQQLSPHAT SSEYVLNRII RDIEAGADPT KHVNGGRDGG  120
QVVASQTTPL HTPPPCGSSG GAAAGTPHPV TRDSRSHHTP PRCRSSGGVA AGTPYPLIGD  180
GCSHTPPTAL QGLGTSTGGP SAGHRPRPCP GEKNTDRWGE AGTEWLCRCR NEVKALMGEE  240
TEAYRCARLK AGFWKYVEER MRTKGYNRAD NQCKNKFNQI LDYYRRLKAH ERWYGLPSYW  300
DMNQTRRKKY NVNFVLRRSW YDIIHPMEKD KDSINLANLM DSGADEERLE DGEGANNGDG  360
KMDGEGEDPA AGSGGSAGGS RPTGFEPMLG KRKRTANNAR ESGVQAVTVA MRAHTTALTR  420
SDLKIAKMRC EATRDIAKQQ TEVHRELLQQ DIVSRERIAN IMGDKVEKGY FVLVDVIRSL  480
RPRTDSPSRD PDSNESR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G33240.1	1e-07	Trihelix family protein